DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat80 and Katnbl1

DIOPT Version :9

Sequence 1:NP_523363.2 Gene:kat80 / 32581 FlyBaseID:FBgn0040207 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_077216.1 Gene:Katnbl1 / 72425 MGIID:1919675 Length:299 Species:Mus musculus


Alignment Length:301 Identity:50/301 - (16%)
Similarity:99/301 - (32%) Gaps:99/301 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   489 NYEMAEDFPVNQNLNYITNNYKPVP---------ATSTINASSKSIKKTTTTTLHKRTT-----N 539
            |:..:.|.|..:..|:.:.|.|.|.         .:.|:..:.||.:|......|::..     |
Mouse    12 NFSNSIDLPRKRISNFTSKNMKEVKRSPKQLAAYISRTVAQAVKSPEKLRKVLYHRKLVRRSFPN 76

  Fly   540 NMAGAKQTSTGIFGGSKLSQVSSVSSMELHKLDDNMVLKKSSSSNVVNKNKRPMGSAQSQFSKEN 604
            .....||:...  ||..::...:..:...| |.:|  |:..|.:.|:|.:.......:|..||.:
Mouse    77 PCYKTKQSPKS--GGCDMANKENELACAGH-LPEN--LRHDSRTFVINTSDSGSSQTESPSSKYS 136

  Fly   605 NQQKNINVEIITKPPMRSRTTLDMRTSHQAKTQEKQIHQQQPMNNRIIMDDHDFDMLSRSHEAVL 669
            .                                                   .|..:|:.||.:.
Mouse   137 G---------------------------------------------------FFSEVSQDHETMA 150

  Fly   670 QELSNR-------------QSSLDLLRHATRSHDVLGALRQARSCGKSIFID----LLGAILEKP 717
            |.|.:|             :|..:|:.:..|..|:            .:.:|    |..::.|:.
Mouse   151 QVLFSRNLRLNVALTFWRKRSISELVAYLVRIEDL------------GVVVDCLPVLTNSLQEEK 203

  Fly   718 SSWNLDFCMFVLPEIYELLQSQHKFHFTRACDTLRIILSNF 758
            ...:|..|:.:||.:..||||:.:.:.....:.|:.::..:
Mouse   204 QYISLGCCVDLLPLVKSLLQSRFEEYVIVGLNWLQAVIKRW 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat80NP_523363.2 Katanin_con80 667..803 CDD:290636 19/109 (17%)
WD40 <4..330 CDD:225201
WD40 14..260 CDD:238121
WD40 repeat 22..58 CDD:293791
WD40 repeat 63..99 CDD:293791
WD40 repeat 106..142 CDD:293791
WD40 repeat 148..184 CDD:293791
WD40 repeat 192..228 CDD:293791
WD40 repeat 285..310 CDD:293791
Katnbl1NP_077216.1 Nuclear localization signal. /evidence=ECO:0000255|PROSITE-ProRule:PRU00768 8..15 1/2 (50%)
Katanin_con80 148..291 CDD:290636 19/109 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
10.960

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