DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat80 and tle2b

DIOPT Version :9

Sequence 1:NP_523363.2 Gene:kat80 / 32581 FlyBaseID:FBgn0040207 Length:819 Species:Drosophila melanogaster
Sequence 2:XP_021329162.1 Gene:tle2b / 564019 ZFINID:ZDB-GENE-050208-677 Length:763 Species:Danio rerio


Alignment Length:353 Identity:73/353 - (20%)
Similarity:133/353 - (37%) Gaps:85/353 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AHDSRVTSLDLGETGRVLVTGGEDRNVNLWAIGQNECFMSLTGHNRSIDCVRFAYKDNFVYS--- 77
            :|...|.::.:..:.|.:.|||:. .|.:|.|.|......:.    .:||:.   :||::.|   
Zfish   475 SHGEVVCAVTISTSTRHVYTGGKG-CVKVWDISQPGSKSPMA----QLDCLN---RDNYIRSCKI 531

  Fly    78 ---------ADDIGIIRRWDL--NSQKIYSTLNGHMKSVRTLDFNPSGEYVVSGSNDTTVRLWDV 131
                     ..:...:..|||  .:.:|.:.|.....:...|..:|..:...|..:|..:.:||:
Zfish   532 LPDGRTLIVGGEASTLSIWDLATPTPRIKAELTSSAPACYALAISPDNKVCFSCCSDGNIVVWDL 596

  Fly   132 QNENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSILIWDIRKSKQIMEFIADPPVTAITCVQ 196
            .|: ..::..:||....:.:..|.||..:.:.||:.::..||:|:.:|:               |
Zfish   597 HNQ-TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRCWDLREGRQL---------------Q 645

  Fly   197 FHPFEFLLAAGRVDGTVSIYDLEHQQLVSQTTHFYGQAIRCITFSDNGECLFVG-SSSGISVIG- 259
            .|.|           |..|:.|.:                |.|    ||.|.|| .||.:.|:. 
Zfish   646 QHDF-----------TSQIFSLGY----------------CPT----GEWLAVGMESSNVEVLHV 679

  Fly   260 WEPDRELDHIKSTWSSLADMKVVNNKLICGCHEIDTVSINTISLDRVIPFYQPPNSLPNF--KHN 322
            .:||:...|:..  |.:..:|..    .||...:.|      ..|.::..::.|.....|  |..
Zfish   680 SKPDKYQLHLHE--SCVLSLKFA----YCGKWFVST------GKDNLLNAWRTPYGASIFQSKET 732

  Fly   323 STNRKSFTRGNQKFRLSVGGAKPAQVQE 350
            |:........:.|:.::..|.|.|.|.|
Zfish   733 SSVLSCDVSPDDKYIVTGSGDKKATVYE 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat80NP_523363.2 Katanin_con80 667..803 CDD:290636
WD40 <4..330 CDD:225201 67/331 (20%)
WD40 14..260 CDD:238121 54/259 (21%)
WD40 repeat 22..58 CDD:293791 8/35 (23%)
WD40 repeat 63..99 CDD:293791 9/49 (18%)
WD40 repeat 106..142 CDD:293791 7/35 (20%)
WD40 repeat 148..184 CDD:293791 9/35 (26%)
WD40 repeat 192..228 CDD:293791 6/35 (17%)
WD40 repeat 285..310 CDD:293791 4/24 (17%)
tle2bXP_021329162.1 TLE_N 1..128 CDD:309152
WD40 471..760 CDD:238121 72/351 (21%)
WD40 repeat 480..519 CDD:293791 9/43 (21%)
WD40 repeat 527..565 CDD:293791 6/37 (16%)
WD40 repeat 570..606 CDD:293791 7/36 (19%)
WD40 repeat 613..648 CDD:293791 10/49 (20%)
WD40 repeat 653..686 CDD:293791 14/52 (27%)
WD40 repeat 694..728 CDD:293791 6/43 (14%)
WD40 repeat 735..759 CDD:293791 4/23 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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