DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kat80 and katnb1

DIOPT Version :9

Sequence 1:NP_523363.2 Gene:kat80 / 32581 FlyBaseID:FBgn0040207 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_998874.1 Gene:katnb1 / 407924 XenbaseID:XB-GENE-998271 Length:655 Species:Xenopus tropicalis


Alignment Length:840 Identity:219/840 - (26%)
Similarity:350/840 - (41%) Gaps:228/840 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PRKLISKIYDIKAHDSRVTSLDLGE-TGRVLVTGGEDRNVNLWAIGQNECFMSLTGHNRSIDCVR 67
            |.|...|:.:|.||.|.|:|:.||: :||::.|||:|..||||::.:..|.||||||...::.||
 Frog     6 PTKTTWKLQEIVAHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVESVR 70

  Fly    68 FAYKDNFVYSADDIGIIRRWDLNSQKIYSTLNGHMKSVRTLDFNPSGEYVVSGSNDTTVRLWDVQ 132
            |...:..:.:....|.:|.|||.:.||..||.||..:|.:|||:|.|::|.|||.||.::||||:
 Frog    71 FNNAEELIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVR 135

  Fly   133 NENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSILIWDIRKSKQIMEFIADP-PVTAITCVQ 196
            .: .|:...:||...|..::|||||.|:|||..:.|:.:||:...|.:.|..... ||..|   :
 Frog   136 RK-GCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNII---E 196

  Fly   197 FHPFEFLLAAGRVDGTVSIYDLEHQQLVSQTTHFYGQAI--RCITFSDNGECLFVGSSSGISVIG 259
            |||.|:|||:|..|.||..:|||..||:..|.   |:.|  |.|.||.:|.|:|.|....:.|.|
 Frog   197 FHPNEYLLASGSADRTVRFWDLEKFQLIGCTE---GETIPVRAILFSSDGGCIFCGGRDALRVYG 258

  Fly   260 WEPDRELDHIKSTWSSLADMKVVNNKLICGCHEIDTVSINTISLDRV--------------IPFY 310
            ||||:..|.:...|..:.|:.:.|.:||.......|:|...:.|.||              :|..
 Frog   259 WEPDQCFDTVPVGWGKVCDLAICNKQLIGVSSAQSTISSFVVDLTRVKMTGCAPQGPVPAEMPIS 323

  Fly   311 QPPNSLPNFKHNSTNRKSFTRGNQKFRLSVGGAKPAQV----QEEHEGDKSGLSSPNYSLEVV-- 369
            ||..:      .::.|:.:.|.      |...:||.:|    .:|.:..::.:.:|....|:.  
 Frog   324 QPAPA------GTSLRRIYERP------STTCSKPKRVSPTSDDEEKESRAEIQNPEDYKEIFQP 376

  Fly   370 NEAVLESAETSPMSSLPPVHLASMAGSSADLAPHHVVYGGAIDSALRQGKYSRVPDNMASYGSSY 434
            ..|:   :.|.|.:|.|                                 :...|::        
 Frog   377 KNAI---SRTPPRNSEP---------------------------------FPAPPED-------- 397

  Fly   435 GAIDTRLMSLNEPSSLHKPDIYNLYPLDKNEEADVQQLEFNLNDSNPPILNNYDNYEMAEDFPVN 499
               ||.:  |.||.: ..||:..                        |..:|.:|.|..:..||.
 Frog   398 ---DTSI--LKEPVA-PIPDVVT------------------------PATSNKNNTEQLQRPPVA 432

  Fly   500 QNLNYITNNYKPVPATSTINASSKSIKKTTTTTLHKRTTNNMAGAKQTSTGIFGGSKLSQVSSVS 564
            .:...:.....||||..                                      ||...:|:. 
 Frog   433 ASTPIVCQEPSPVPAPQ--------------------------------------SKPPVISAA- 458

  Fly   565 SMELHKLDDNMVLKKSSSSNVVNKNKRPMGSAQSQFSKENNQQKNINVEIITKPPMRSRTTLDMR 629
                                    ...|:|...:.|                .|.:::.:..:  
 Frog   459 ------------------------RNEPIGLKAADF----------------LPAVKTSSPTE-- 481

  Fly   630 TSHQAKTQEKQIHQQQPMNNRIIMDDHDFDMLSRSHEAVLQELSNRQSSLDLLRHATRSHDVLGA 694
                                  ::||.....:.:.|:.:...|::|..:||.:|....|.|:..:
 Frog   482 ----------------------VVDDEAVSQIRKGHDTMCMVLTSRMRNLDTVRAVWSSGDIKTS 524

  Fly   695 LRQARSCGK-SIFIDLLGAILEKPSSWNLDFCMFVLPEIYELLQSQHKFHFTRACDTLRIILSNF 758
            :..|.:... |:.:|||..|.:|.|.|.||.|:.|||:|.::|||:::.:....|.:|::||..|
 Frog   525 IDSAVAINDLSVVVDLLNIINQKASLWKLDLCLTVLPQIEKMLQSKYESYVQTGCISLKLILQRF 589

  Fly   759 LPTIQENLDSWAANGLGVDVTREDRQRKCAECQRWLLQIKNL-----PESTHFGSTLSQL 813
            ||.|.:.|.  |...:|||::||:|..||..|.:.|..:..|     .:|..:||...:|
 Frog   590 LPLITDILA--APPSVGVDISREERLSKCKLCYKQLRILSPLVKSKASQSGRYGSAFREL 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat80NP_523363.2 Katanin_con80 667..803 CDD:290636 47/141 (33%)
WD40 <4..330 CDD:225201 127/343 (37%)
WD40 14..260 CDD:238121 104/249 (42%)
WD40 repeat 22..58 CDD:293791 17/36 (47%)
WD40 repeat 63..99 CDD:293791 11/35 (31%)
WD40 repeat 106..142 CDD:293791 16/35 (46%)
WD40 repeat 148..184 CDD:293791 15/35 (43%)
WD40 repeat 192..228 CDD:293791 17/35 (49%)
WD40 repeat 285..310 CDD:293791 8/38 (21%)
katnb1NP_998874.1 WD40 7..257 CDD:238121 105/256 (41%)
WD 1 18..58 18/39 (46%)
WD 2 61..100 12/38 (32%)
WD40 repeat 67..103 CDD:293791 12/35 (34%)
WD 3 103..142 19/39 (49%)
WD40 repeat 108..144 CDD:293791 17/36 (47%)
WD 4 145..184 16/38 (42%)
WD40 repeat 151..186 CDD:293791 14/34 (41%)
WD 5 187..226 19/41 (46%)
WD40 repeat 192..228 CDD:293791 18/38 (47%)
WD 6 229..269 17/39 (44%)
Herpes_BLLF1 <307..>506 CDD:282904 46/387 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 316..453 37/260 (14%)
Katanin_con80 497..648 CDD:372820 51/153 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 1.000 Domainoid score I8008
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4302
Inparanoid 1 1.050 321 1.000 Inparanoid score I2478
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D159977at33208
OrthoFinder 1 1.000 - - FOG0006599
OrthoInspector 1 1.000 - - oto104796
Panther 1 1.100 - - LDO PTHR19845
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5030
SonicParanoid 1 1.000 - - X3736
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.100

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