DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat80 and wsb1

DIOPT Version :9

Sequence 1:NP_523363.2 Gene:kat80 / 32581 FlyBaseID:FBgn0040207 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_989387.1 Gene:wsb1 / 395021 XenbaseID:XB-GENE-5920309 Length:422 Species:Xenopus tropicalis


Alignment Length:333 Identity:78/333 - (23%)
Similarity:132/333 - (39%) Gaps:60/333 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SRVTSLDLGETGRVLVTGGEDRNVN----LWAIG--------QNECFMSLTGHNRSIDCVRFAYK 71
            ||..| |||:..:.:     :..::    :|::.        |:.|.        :|:..||.:.
 Frog    87 SRQNS-DLGQRNKPI-----EHTIDCGDIVWSLAFGSSVPEKQSRCV--------NIEWHRFKFG 137

  Fly    72 DNFVYSADDI--GIIRRWDLNSQKIYSTLNGHMKSVRTLDFNPSGEYV-VSGSNDTTVRLWDVQN 133
            .:.:..|..:  |.|:.||:.:.|:...|..|.:.||.|.|.|.|..: ||.|.|.|:|:||:::
 Frog   138 QDQLLLATGLSNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKD 202

  Fly   134 ENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSILIWDIRKSKQIMEFIADPPVTAITCVQFH 198
            :.|.:||.|||.:.|....||||...:.|.|...::.:||:.|...|.:.  |.....:...:|.
 Frog   203 DGNMMKVLRGHQNWVYCCAFSPDSSMLCSVGAGKAVFLWDMDKYTMIRKL--DGHYNDVVACEFS 265

  Fly   199 PFEFLLAAGRVDGTVSIYDLEHQQLVSQTTHFYGQAIRCITFSDNGECLFVGSSSGISVIGWEPD 263
            |...|||....|..|.::|.....::.:..|.:..........|||.              |...
 Frog   266 PDGALLATASYDTRVYVWDPHIGSILFEFGHLFPPPTPIFAGGDNGR--------------WVKS 316

  Fly   264 RELDHIKSTWSSLADMKVVN---------------NKLICGCHEIDTVSINTISLDRVIPFYQPP 313
            ....|.....:||||..:|.               :|.:|.....|...:...:.|....|:..|
 Frog   317 VSFSHDGVHIASLADDNLVRFWRIDKSYPVEVAPLSKGLCCAFSTDGSVLAAGTQDGNAYFWSTP 381

  Fly   314 NSLPNFKH 321
            ..:.:.:|
 Frog   382 KYVSSLQH 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat80NP_523363.2 Katanin_con80 667..803 CDD:290636
WD40 <4..330 CDD:225201 78/333 (23%)
WD40 14..260 CDD:238121 64/255 (25%)
WD40 repeat 22..58 CDD:293791 7/47 (15%)
WD40 repeat 63..99 CDD:293791 9/37 (24%)
WD40 repeat 106..142 CDD:293791 16/36 (44%)
WD40 repeat 148..184 CDD:293791 11/35 (31%)
WD40 repeat 192..228 CDD:293791 8/35 (23%)
WD40 repeat 285..310 CDD:293791 4/24 (17%)
wsb1NP_989387.1 WD 1 124..165 10/48 (21%)
WD40 repeat 134..168 CDD:293791 8/33 (24%)
WD40 135..379 CDD:238121 64/259 (25%)
WD 2 168..208 16/39 (41%)
WD40 repeat 174..212 CDD:293791 16/37 (43%)
WD 3 212..251 13/38 (34%)
WD40 repeat 217..253 CDD:293791 11/37 (30%)
WD 4 254..293 8/38 (21%)
WD40 repeat 261..307 CDD:293791 9/45 (20%)
WD 5 309..346 10/50 (20%)
WD40 repeat 314..353 CDD:293791 6/38 (16%)
WD40 repeat 354..390 CDD:293791 6/36 (17%)
SOCS_WSB1_SWIP1 382..421 CDD:239715 1/8 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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