DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat80 and rbbp4

DIOPT Version :9

Sequence 1:NP_523363.2 Gene:kat80 / 32581 FlyBaseID:FBgn0040207 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_997760.1 Gene:rbbp4 / 321726 ZFINID:ZDB-GENE-030131-445 Length:424 Species:Danio rerio


Alignment Length:256 Identity:62/256 - (24%)
Similarity:106/256 - (41%) Gaps:53/256 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 LNGHMKSVRTLDFNPS-GEYVVSGSNDTTVRLWD---VQNENNCI---KVCRGHMSHVNSVKFSP 155
            |.||.|....|.:||: ...::|.|:|.|:.|||   |..|...:   .:..||.:.|..|.   
Zfish   173 LRGHQKEGYGLSWNPNLRGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVS--- 234

  Fly   156 DGLW-IASAGLEGSI------LIWDIRKSKQIM-EFIADPPVTAITCVQFHPF-EFLLAAGRVDG 211
               | :....|.||:      :|||.|.:.... ....|.....:.|:.|:|: ||:||.|..|.
Zfish   235 ---WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADK 296

  Fly   212 TVSIYDLEHQQLVSQTTHFYGQAIRCITFSDNGECLFVGSSS-------GISVIGWE-------- 261
            ||:::||.:.:|...:...:...|..:.:|.:.|.:...|.:       .:|.||.|        
Zfish   297 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAED 361

  Fly   262 --PDRELDHIKSTWSSLADMKVVNNK--LICGCHEIDTVSINTISLDRVIPFYQPPNSLPN 318
              |:....|...| :.::|.....|:  :||           ::|.|.::..:|...::.|
Zfish   362 GPPELLFIHGGHT-AKISDFSWNPNEPWVIC-----------SVSEDNIMQVWQMAENIYN 410

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
kat80NP_523363.2 Katanin_con80 667..803 CDD:290636
WD40 <4..330 CDD:225201 62/256 (24%)
WD40 14..260 CDD:238121 49/184 (27%)
WD40 repeat 22..58 CDD:293791