DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kat80 and Katnb1

DIOPT Version :9

Sequence 1:NP_523363.2 Gene:kat80 / 32581 FlyBaseID:FBgn0040207 Length:819 Species:Drosophila melanogaster
Sequence 2:XP_017456687.1 Gene:Katnb1 / 291852 RGDID:1311256 Length:659 Species:Rattus norvegicus


Alignment Length:840 Identity:222/840 - (26%)
Similarity:342/840 - (40%) Gaps:216/840 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALP--RKLISKIYDIKAHDSRVTSLDLGE-TGRVLVTGGEDRNVNLWAIGQNECFMSLTGHNRS 62
            ||.|  .|...|:.:|.||.|.|:||.||: :||:|.|||:|..||||:|.:..|.||||||...
  Rat     1 MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65

  Fly    63 IDCVRFAYKDNFVYSADDIGIIRRWDLNSQKIYSTLNGHMKSVRTLDFNPSGEYVVSGSNDTTVR 127
            ::.||....:..:.:....|.||.|||.:.||..||.||..::.:|||:|.||:|.|||.||.::
  Rat    66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIK 130

  Fly   128 LWDVQNENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSILIWDIRKSKQIMEFIADPPVTA- 191
            |||::.: .|:...|||...|..::|||||.|:|||..:.::.:||:...|.:.||   |..|. 
  Rat   131 LWDIRRK-GCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF---PGHTGP 191

  Fly   192 ITCVQFHPFEFLLAAGRVDGTVSIYDLEHQQLVSQTTHFYGQAIRCITFSDNGECLFVGSSSGIS 256
            :..|:|||.|:|||:|..|.|:..:|||..|:||......| .:|.:.|:.:|.||:.|....:.
  Rat   192 VNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG-PVRSVLFNPDGCCLYSGCQDSLR 255

  Fly   257 VIGWEPDRELDHIKSTWSSLADMKVVNNKLICGCHEIDTVSINTISLDRVI---PFYQPP--NSL 316
            |.||||:|..|.:...|..:||:.:.|::||........||...:.|.||.   ...|.|  .|.
  Rat   256 VYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTRVTRTGTVTQDPVQASQ 320

  Fly   317 PNFKHNSTNRKSFTRGNQKFRLSVGGAKPAQVQEEHEGDKSGLSSPNYSLEVVNEAVLESAET-- 379
            |..:.......|..|..:  |.|...:||.:|:...|.::...||.:...|..:.|.:::||.  
  Rat   321 PQTQQTPNPGVSLRRIYE--RPSTTCSKPQRVKHNSESERRSPSSEDDKDERESRAEIQNAEDYN 383

  Fly   380 ---SPMSSL---PPVHLASMAGSSADLAPHHVVYGGAIDSALRQGKYSRVPDNMASYGSSYGAID 438
               .|.:|:   ||...........|          .|.:|....|.|...|           :.
  Rat   384 EIFQPKNSISRTPPRRSEPFPAPPED----------DIATAKEASKPSPAMD-----------VQ 427

  Fly   439 TRLMSLNEPSSLHKPDIYNLYPLDKNEEADVQQLEFNLNDSNPPILNNYDNYEMAEDFPVNQNLN 503
            ..:.|...|:   :|.:....|..|.|                |::                   
  Rat   428 LPVPSQEVPA---RPSVMTSTPAPKGE----------------PVI------------------- 454

  Fly   504 YITNNYKPVPATSTINASSKSIKKTTTTTLHKRTTNNMAGAKQTSTGIFGGSKLSQVSSVSSMEL 568
                    :|||                                                     
  Rat   455 --------IPAT----------------------------------------------------- 458

  Fly   569 HKLDDNMVLKKSSSSNVVNKNKRPMGSAQSQFSKENNQQKNINVEIITKPPMRSRTTLDMRTSHQ 633
                                ...|:|...|.|...                        ::...|
  Rat   459 --------------------RNEPIGLKASDFLPA------------------------VKVPQQ 479

  Fly   634 AKTQEKQIHQQQPMNNRIIMDDHDFDMLSRSHEAVLQELSNRQSSLDLLRHATRSHDVLGALRQA 698
            |:                ::|:.....:.:.|:.:...|::|..:||.:|....:.|:..::..|
  Rat   480 AE----------------LVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDIKTSVDSA 528

  Fly   699 RSCGK-SIFIDLLGAILEK----PSSWNLDFCMFVLPEIYELLQSQHKFHFTRACDTLRIILSNF 758
            .:... |:.:|||..:.:|    .|.|.||.|..|||:|.:||||:::.:....|.:|::||..|
  Rat   529 VAINDLSVVVDLLNIVNQKACLSSSLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRF 593

  Fly   759 LPTIQENLDSWAANGLGVDVTREDRQRKCAECQRWLLQIKNLPEST-----HFGSTLSQL 813
            ||.|.:.|.  |...:|||::||:|..||..|.:.|..|..|.:|.     ..||...:|
  Rat   594 LPLITDILA--APPSVGVDISREERLHKCRLCFKQLKSISGLVKSRSGLSGRHGSAFREL 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat80NP_523363.2 Katanin_con80 667..803 CDD:290636 47/140 (34%)
WD40 <4..330 CDD:225201 128/334 (38%)
WD40 14..260 CDD:238121 103/247 (42%)
WD40 repeat 22..58 CDD:293791 20/36 (56%)
WD40 repeat 63..99 CDD:293791 11/35 (31%)
WD40 repeat 106..142 CDD:293791 16/35 (46%)
WD40 repeat 148..184 CDD:293791 14/35 (40%)
WD40 repeat 192..228 CDD:293791 17/35 (49%)
WD40 repeat 285..310 CDD:293791 7/27 (26%)
Katnb1XP_017456687.1 WD40 7..257 CDD:238121 104/254 (41%)
WD40 repeat 67..103 CDD:293791 12/35 (34%)
WD40 repeat 108..144 CDD:293791 16/36 (44%)
WD40 repeat 151..186 CDD:293791 14/37 (38%)
WD40 repeat 192..228 CDD:293791 17/35 (49%)
WD40 repeat 234..261 CDD:293791 9/26 (35%)
PRK14951 <386..>494 CDD:237865 27/287 (9%)
Katanin_con80 497..652 CDD:404758 51/157 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335798
Domainoid 1 1.000 87 1.000 Domainoid score I7858
eggNOG 1 0.900 - - E1_KOG0267
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4302
Inparanoid 1 1.050 324 1.000 Inparanoid score I2414
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D159977at33208
OrthoFinder 1 1.000 - - FOG0006599
OrthoInspector 1 1.000 - - oto98109
orthoMCL 1 0.900 - - OOG6_103099
Panther 1 1.100 - - LDO PTHR19845
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3736
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.800

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