DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat80 and Tle4

DIOPT Version :9

Sequence 1:NP_523363.2 Gene:kat80 / 32581 FlyBaseID:FBgn0040207 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001289876.1 Gene:Tle4 / 21888 MGIID:104633 Length:774 Species:Mus musculus


Alignment Length:333 Identity:67/333 - (20%)
Similarity:131/333 - (39%) Gaps:71/333 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IKAHDSRVTSLDLGET---------GRVLVTGGEDRNVNLWAIGQ--NECFMSLTGHNRSIDCVR 67
            |..|..::.:|:.||.         .|.:.|||:. .|.:|.|..  |:..:|      .:||:.
Mouse   475 IPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKG-CVKVWDISHPGNKSPVS------QLDCLN 532

  Fly    68 FAYKDNFVYS------------ADDIGIIRRWDL--NSQKIYSTLNGHMKSVRTLDFNPSGEYVV 118
               :||::.|            ..:...:..|||  .:.:|.:.|.....:...|..:|..:...
Mouse   533 ---RDNYIRSCRLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCF 594

  Fly   119 SGSNDTTVRLWDVQNENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSILIWDIRKSKQIM-- 181
            |..:|..:.:||:.|: ..::..:||....:.:..|.||..:.:.||:.::..||:|:.:|:.  
Mouse   595 SCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH 658

  Fly   182 EFIADPPVTAITCVQFHPFEFLLAAGRVDGTVSIYDL---EHQQLVSQTTHFYGQAIRCITFSDN 243
            :|     .:.|..:.:.|....||.|..:..|.:..:   :..||     |.:...:..:.|:..
Mouse   659 DF-----TSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKPDKYQL-----HLHESCVLSLKFAHC 713

  Fly   244 GECLFVGSSSGISVIGWEPDRELDHIKSTW-----SSLADMKVVNNKLICGCHEIDTVSINTISL 303
            |:              |......|::.:.|     :|:...|..::.|.|.. .:|...|.|.|.
Mouse   714 GK--------------WFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI-SVDDKYIVTGSG 763

  Fly   304 DRVIPFYQ 311
            |:....|:
Mouse   764 DKKATVYE 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat80NP_523363.2 Katanin_con80 667..803 CDD:290636
WD40 <4..330 CDD:225201 67/333 (20%)
WD40 14..260 CDD:238121 54/275 (20%)
WD40 repeat 22..58 CDD:293791 12/46 (26%)
WD40 repeat 63..99 CDD:293791 9/49 (18%)
WD40 repeat 106..142 CDD:293791 7/35 (20%)
WD40 repeat 148..184 CDD:293791 9/37 (24%)
WD40 repeat 192..228 CDD:293791 8/38 (21%)
WD40 repeat 285..310 CDD:293791 7/24 (29%)
Tle4NP_001289876.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
TLE_N 16..139 CDD:397828
GP domain. /evidence=ECO:0000250|UniProtKB:Q04727 138..205
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 141..163
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..358
CcN domain. /evidence=ECO:0000250|UniProtKB:Q04727 206..275
SP domain. /evidence=ECO:0000250|UniProtKB:Q04727 276..453
WD 1 486..524 10/38 (26%)
WD40 487..771 CDD:238121 63/319 (20%)
WD40 repeat 491..530 CDD:293791 9/45 (20%)
WD 2 532..571 6/41 (15%)
WD40 repeat 538..576 CDD:293791 6/37 (16%)
WD 3 576..615 7/39 (18%)
WD40 repeat 581..617 CDD:293791 7/36 (19%)
WD 4 618..657 11/38 (29%)
WD40 repeat 624..659 CDD:293791 9/34 (26%)
WD 5 659..698 7/43 (16%)
WD40 repeat 664..697 CDD:293791 6/32 (19%)
WD 6 700..739 6/52 (12%)
WD40 repeat 705..739 CDD:293791 6/47 (13%)
WD 7 741..774 9/32 (28%)
WD40 repeat 746..770 CDD:293791 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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