DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat80 and F55F8.3

DIOPT Version :9

Sequence 1:NP_523363.2 Gene:kat80 / 32581 FlyBaseID:FBgn0040207 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_491653.2 Gene:F55F8.3 / 172224 WormBaseID:WBGene00018891 Length:910 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat80NP_523363.2 Katanin_con80 667..803 CDD:290636
WD40 <4..330 CDD:225201
WD40 14..260 CDD:238121
WD40 repeat 22..58 CDD:293791
WD40 repeat 63..99 CDD:293791
WD40 repeat 106..142 CDD:293791
WD40 repeat 148..184 CDD:293791
WD40 repeat 192..228 CDD:293791
WD40 repeat 285..310 CDD:293791
F55F8.3NP_491653.2 WD40 58..427 CDD:225201
WD40 repeat 58..94 CDD:293791
WD40 96..427 CDD:295369
WD40 repeat 99..144 CDD:293791
WD40 repeat 150..188 CDD:293791
WD40 repeat 193..256 CDD:293791
WD40 248..618 CDD:225201
WD40 repeat 277..312 CDD:293791
WD40 repeat 318..358 CDD:293791
WD40 321..608 CDD:295369
WD40 repeat 364..400 CDD:293791
WD40 repeat 405..441 CDD:293791
WD40 repeat 449..485 CDD:293791
WD40 repeat 491..524 CDD:293791
WD40 repeat 530..584 CDD:293791
WD40 repeat 591..613 CDD:293791
WD40 repeat 661..692 CDD:293791
Utp12 760..861 CDD:281932
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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