DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat80 and Grwd1

DIOPT Version :9

Sequence 1:NP_523363.2 Gene:kat80 / 32581 FlyBaseID:FBgn0040207 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_700468.2 Gene:Grwd1 / 101612 MGIID:2141989 Length:446 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat80NP_523363.2 Katanin_con80 667..803 CDD:290636
WD40 <4..330 CDD:225201
WD40 14..260 CDD:238121
WD40 repeat 22..58 CDD:293791
WD40 repeat 63..99 CDD:293791
WD40 repeat 106..142 CDD:293791
WD40 repeat 148..184 CDD:293791
WD40 repeat 192..228 CDD:293791
WD40 repeat 285..310 CDD:293791
Grwd1NP_700468.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
CAF1C_H4-bd 44..111 CDD:289068
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..141
WD40 repeat 175..212 CDD:293791
WD40 <194..>383 CDD:225201
WD40 206..>384 CDD:295369
WD 1 212..252
WD40 repeat 218..259 CDD:293791
WD 2 259..299
WD40 repeat 265..306 CDD:293791
WD 3 306..345
WD40 repeat 311..350 CDD:293791
WD 4 351..391
WD 5 412..445
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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