DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat80 and coro7

DIOPT Version :9

Sequence 1:NP_523363.2 Gene:kat80 / 32581 FlyBaseID:FBgn0040207 Length:819 Species:Drosophila melanogaster
Sequence 2:XP_002932508.2 Gene:coro7 / 100492934 XenbaseID:XB-GENE-949602 Length:907 Species:Xenopus tropicalis


Alignment Length:515 Identity:107/515 - (20%)
Similarity:197/515 - (38%) Gaps:131/515 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RKLISKIYDIKAHDSRVTSLDLGE-TGRVLVTGGEDRNVNLWAIGQNECFMSLTGHNRSID-CVR 67
            ::.:|:   |..|...||...... ...:||||..|:.:.||.:.:.....||:|....:: .||
 Frog    67 KRTVSR---ISCHTDLVTDFAFSPFADDLLVTGSSDQTIKLWRVSETGDAGSLSGTLAGVEGQVR 128

  Fly    68 FAYKDNFVYSADDIGI------IRRWDLNSQKIYSTLNGHMKSVRTLDFNPSGEYVVSGSNDTTV 126
            ..   .|..|||.:.:      ::.|||:.:...:.|..|...|:::.::..|..:.:...|..:
 Frog   129 SL---QFHPSADSLLVTAAAKTVQLWDLSRESKLTALEAHGDQVQSVCWSQDGVLLGTSCKDKRL 190

  Fly   127 RLWDVQNENNCIKVCRGHMSHVNS-VKFSPDGLWIASAGL----EGSILIWDIRK-SKQIMEFIA 185
            |::|.::....|:..:||.|:.:| |:::.....:.::|.    |..:|:||||. |:.:..|..
 Frog   191 RIFDARSGTGAIQNAQGHDSNKDSRVQWTNSNSHLLTSGFNQVRERELLLWDIRSFSRPLTSFTL 255

  Fly   186 DPPVTAITCVQFHPFEFLLAAGRVDGTVSIYDLEHQQLVSQTTHFYGQAIRCITFSDNGECLFVG 250
            |  .::...:..:.::..|......|..|:|.:|    ||...|...|..:|:|..         
 Frog   256 D--ASSGLLIPLYDYDTGLLILGAQGEGSLYCME----VSTEPHSLTQISQCVTEE--------- 305

  Fly   251 SSSGISVIGWEPDRELDHIKSTWSSLADMKVVNNKLI-----------------------CGCHE 292
            .|.|::::   |...||.:.   ..|..:..:.:|.|                       .||..
 Frog   306 QSRGLALV---PKLCLDVMN---CELLRLLQLTDKFIIPISYNVQRKSVKELQVDLFPNTAGCTP 364

  Fly   293 I---------DTVSINTISLDRVIPFYQPPNSLPNFKHNSTNRKSFTRGNQKFRLSVGGAKPAQV 348
            .         |...:..:|||   |..:|   .|:.:.||..:|:..:.|.   :....|:|:  
 Frog   365 ALTAQDWWKGDNKQVQKVSLD---PSRRP---APSCQGNSGKKKNEPQEND---IVSSIAEPS-- 418

  Fly   349 QEEHEGDKSGLSSPNYSLEVVNEAVLES-AETSPMSSLPPV---------------HLASMAGSS 397
                  |.|.||||:.||...:..::.| ::.|..|.|.|.               |:.::.|.|
 Frog   419 ------DGSTLSSPSSSLTSPSSGIVSSTSQRSLQSFLGPSSRLRHTQGTVLHRDHHITNLRGIS 477

  Fly   398 AD-------------------LAPHHVVYGGAIDSALRQGKYSRVPDNMASYGSSYGAID 438
            ..                   .||     ||.: :.|...:..|:||.:.:..:|....|
 Frog   478 QSTPGESDGFCVNYQRAAVPLAAP-----GGQV-AVLEFSQTGRLPDTLPTVQNSVPVTD 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat80NP_523363.2 Katanin_con80 667..803 CDD:290636
WD40 <4..330 CDD:225201 78/370 (21%)
WD40 14..260 CDD:238121 59/259 (23%)
WD40 repeat 22..58 CDD:293791 10/36 (28%)
WD40 repeat 63..99 CDD:293791 9/42 (21%)
WD40 repeat 106..142 CDD:293791 5/35 (14%)
WD40 repeat 148..184 CDD:293791 10/41 (24%)
WD40 repeat 192..228 CDD:293791 7/35 (20%)
WD40 repeat 285..310 CDD:293791 9/56 (16%)
coro7XP_002932508.2 DUF1899 3..61 CDD:370206
WD40 80..419 CDD:392136 78/379 (21%)
WD40 repeat 81..122 CDD:293791 11/40 (28%)
WD40 repeat 127..163 CDD:293791 9/38 (24%)
WD40 repeat 170..206 CDD:293791 5/35 (14%)
WD40 repeat 213..254 CDD:293791 10/40 (25%)
WD40 repeat 261..300 CDD:293791 9/42 (21%)
WD40 454..871 CDD:392136 13/84 (15%)
WD40 repeat 530..574 CDD:293791 1/2 (50%)
WD40 repeat 579..616 CDD:293791
WD40 repeat 623..659 CDD:293791
WD40 repeat 666..710 CDD:293791
WD40 repeat 719..756 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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