DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat80 and wdr77

DIOPT Version :9

Sequence 1:NP_523363.2 Gene:kat80 / 32581 FlyBaseID:FBgn0040207 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001120009.1 Gene:wdr77 / 100144971 XenbaseID:XB-GENE-972898 Length:333 Species:Xenopus tropicalis


Alignment Length:244 Identity:64/244 - (26%)
Similarity:100/244 - (40%) Gaps:48/244 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 ADDIGIIRRWDLNSQKIY----STLNGHMKSVRTLDFNPSGEYVVSGSNDTTVRLWDVQNE---N 135
            |.|.|.:..|::..::..    .|...|...|::|.....|...|||..|.:|::||:..:   |
 Frog    87 ASDSGAVELWEILEKESLLVNKFTKYEHDDIVKSLSVFSDGTQAVSGGKDFSVKVWDLTQKTLLN 151

  Fly   136 NCIKVCRGHMSHVNSVKFSP--DGLWIASAGLEGSILIWDIRKSKQIMEFIADPPVTAITCVQFH 198
            :.|    .|.|.||.|...|  :.::: |.|.:|.||:||.||.|.........|.|..|.|.:|
 Frog   152 SYI----AHSSEVNCVAACPGKEAIFL-SCGEDGKILLWDTRKPKPATRIDFFTPDTIPTSVTWH 211

  Fly   199 P-FEFLLAAGRVDGTVSIYDLEHQQLVSQTTHFYGQAIRCITFSDNGECLFVGSSSGISV----- 257
            | .:...|.|...|.|.:.:|::...| |.:..:.|:|..:.:|.:........|...:|     
 Frog   212 PEKDDTFACGDEIGNVYLVNLKNLDSV-QKSSVHSQSITGLAYSYHSSPYLASISEDCTVAVYDS 275

  Fly   258 -----------------IGWEPDRELDHIKST---WSSLADMKVVNNKL 286
                             :.|.|   |||.|.|   |    |.||:::.|
 Frog   276 DFSEAFRDLSHRDFVTGVAWSP---LDHSKFTTVGW----DHKVLHHHL 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat80NP_523363.2 Katanin_con80 667..803 CDD:290636
WD40 <4..330 CDD:225201 64/244 (26%)
WD40 14..260 CDD:238121 52/213 (24%)
WD40 repeat 22..58 CDD:293791
WD40 repeat 63..99 CDD:293791 5/24 (21%)
WD40 repeat 106..142 CDD:293791 11/38 (29%)
WD40 repeat 148..184 CDD:293791 14/37 (38%)
WD40 repeat 192..228 CDD:293791 11/36 (31%)
WD40 repeat 285..310 CDD:293791 1/2 (50%)
wdr77NP_001120009.1 WD40 <43..312 CDD:225201 61/237 (26%)
WD40 70..>297 CDD:295369 53/215 (25%)
WD40 repeat 73..110 CDD:293791 4/22 (18%)
WD40 repeat 119..154 CDD:293791 10/34 (29%)
WD40 repeat 160..197 CDD:293791 14/37 (38%)
WD40 repeat 205..242 CDD:293791 11/37 (30%)
WD40 repeat 248..273 CDD:293791 4/24 (17%)
WD40 repeat 290..312 CDD:293791 9/28 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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