DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat80 and tle1

DIOPT Version :9

Sequence 1:NP_523363.2 Gene:kat80 / 32581 FlyBaseID:FBgn0040207 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001163974.1 Gene:tle1 / 100101799 XenbaseID:XB-GENE-868100 Length:780 Species:Xenopus tropicalis


Alignment Length:333 Identity:69/333 - (20%)
Similarity:131/333 - (39%) Gaps:71/333 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IKAHDSRVTSLDLGET---------GRVLVTGGEDRNVNLWAIGQ--NECFMSLTGHNRSIDCVR 67
            |..|..::.:|:.||.         .|.:.|||:. .|.:|.|.|  |:..:|      .:||:.
 Frog   481 IPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKG-CVKVWDISQPGNKSPVS------QLDCLN 538

  Fly    68 FAYKDNFVYS------------ADDIGIIRRWDL--NSQKIYSTLNGHMKSVRTLDFNPSGEYVV 118
               :||::.|            ..:...:..|||  .:.:|.:.|.....:...|..:|..:...
 Frog   539 ---RDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCF 600

  Fly   119 SGSNDTTVRLWDVQNENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSILIWDIRKSKQIM-- 181
            |..:|..:.:||:.|: ..::..:||....:.:..|.||..:.:.||:.::..||:|:.:|:.  
 Frog   601 SCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH 664

  Fly   182 EFIADPPVTAITCVQFHPFEFLLAAGRVDGTVSIYDL---EHQQLVSQTTHFYGQAIRCITFSDN 243
            :|     .:.|..:.:.|....||.|.....|.:..:   :..||     |.:...:..:.|:..
 Frog   665 DF-----TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL-----HLHESCVLSLKFAYC 719

  Fly   244 GECLFVGSSSGISVIGWEPDRELDHIKSTW-----SSLADMKVVNNKLICGCHEIDTVSINTISL 303
            |:              |......|::.:.|     :|:...|..::.|.|.. .||...|.|.|.
 Frog   720 GK--------------WFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI-SIDDKYIVTGSG 769

  Fly   304 DRVIPFYQ 311
            |:....|:
 Frog   770 DKKATVYE 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat80NP_523363.2 Katanin_con80 667..803 CDD:290636
WD40 <4..330 CDD:225201 69/333 (21%)
WD40 14..260 CDD:238121 55/275 (20%)
WD40 repeat 22..58 CDD:293791 13/46 (28%)
WD40 repeat 63..99 CDD:293791 9/49 (18%)
WD40 repeat 106..142 CDD:293791 7/35 (20%)
WD40 repeat 148..184 CDD:293791 9/37 (24%)
WD40 repeat 192..228 CDD:293791 8/38 (21%)
WD40 repeat 285..310 CDD:293791 8/24 (33%)
tle1NP_001163974.1 TLE_N 1..143 CDD:281857
WD40 <486..778 CDD:225201 67/328 (20%)
WD40 493..777 CDD:238121 65/319 (20%)
WD40 repeat 497..536 CDD:293791 10/45 (22%)
WD40 repeat 544..582 CDD:293791 6/37 (16%)
WD40 repeat 587..623 CDD:293791 7/36 (19%)
WD40 repeat 630..665 CDD:293791 9/34 (26%)
WD40 repeat 670..703 CDD:293791 6/32 (19%)
WD40 repeat 711..745 CDD:293791 6/47 (13%)
WD40 repeat 752..776 CDD:293791 8/24 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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