DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment disco and Bnc1

DIOPT Version :9

Sequence 1:NP_001033847.1 Gene:disco / 32579 FlyBaseID:FBgn0000459 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_001102386.1 Gene:Bnc1 / 365299 RGDID:1309042 Length:990 Species:Rattus norvegicus


Alignment Length:636 Identity:157/636 - (24%)
Similarity:221/636 - (34%) Gaps:221/636 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 HGPHSHQHVHSHLPSHPQ-------PNAASPASSPGGSSGSGSGSAAG----SGTGSGSSLKPRR 70
            |||.|.....:..|...:       |:|.:........|.|.|.|.|.    :.....:.:||.|
  Rat   280 HGPFSDSGFLTSTPFQVEKEQCLSCPDAVTQKEDSAHLSDSSSYSIASKLERTQLSPEAKMKPER 344

  Fly    71 WGSPPINLAGQFINPATGKK-RVQCSICFKTFCDKGALKIHFSAVHLREMHKCTVEGCNMVFSSR 134
                         |..:.|| ||.|:.|.|||.|||.||||::||||:..||||:|||||||||.
  Rat   345 -------------NSLSAKKGRVFCTACEKTFYDKGTLKIHYNAVHLKIKHKCTIEGCNMVFSSL 396

  Fly   135 RSRNRHSANPNPKLHSP--------HIRRKISPHDGRTAQQ--FPVFSP--------------GT 175
            ||||||||||||:||.|        .:|..::.....|.::  |.|.||              ..
  Rat   397 RSRNRHSANPNPRLHMPMNRNNRDKDLRNSLNLASSETYKRPGFTVMSPDCGPLPGYTGSVEDSK 461

  Fly   176 AAAAAAVAGRLPVAFPGL-----------LPPPPPHHGHHPYVMFGGQAGLHGLGLLSTGCQDPD 229
            ...|.:..|:..|.||.|           .|..|....:.|.:       |..|.|:|:...: .
  Rat   462 GQPAFSSIGQNGVLFPNLKTVQPVLPFYRSPATPAELANTPGM-------LPSLPLISSSIPE-Q 518

  Fly   230 SGSVDNEQDADPEDDNDFVYVDMQANSSSPAASSEDQEEHERDNEQDEEMHCSLSLASSSSIAAD 294
            ..|.|...||.|:..:        ..||.|.     :.|.|.....||:.|   ||:|...:.. 
  Rat   519 LVSTDVPFDALPKKKS--------RKSSMPI-----KIEKEAVEIADEKRH---SLSSDDDVPL- 566

  Fly   295 EERAADQPLDFSLHKRRKSEQDREQ------------------------------EQEQEQERER 329
            :..:.|:|.|.|....|..|:.|.|                              ||....|||.
  Rat   567 QVVSEDEPEDSSPQSDRVPEEQRTQLGLEEPLPQGERACHLESVIEPHGAISRTLEQTTLTERES 631

  Fly   330 EAE--------KEQEQD--------------------------------------------VESD 342
            |.:        :|.|.|                                            :|..
  Rat   632 EQKVALSSVMPREVEHDGHERHFTPGLGPQIPFPDYMELQQRLLAGGLFGALSNRGMAFPFLEES 696

  Fly   343 KEHEPEQEHELERE-----------KRSPSDAFSMDQLLGKRKRHDSTA---SSSACSTAAASSA 393
            ||.....||.|.|:           |::..:|.||       |.|:.:.   .:.||:.....:|
  Rat   697 KELGHLSEHALVRQKEETRFQCDICKKTFKNACSM-------KTHEKSTHARETHACTVDGCGAA 754

  Fly   394 SSSSASASANPPQTSIKMDLDPDSDSAYMTSRRQMLPLPVLDLEEHHH--LRLLQTQMFAAAAAA 456
            ..|..|.               |..|:.::..:::|....|:..|.|.  ..|||.....|....
  Rat   755 FLSRRSR---------------DRHSSNLSLHQKVLNEEALETSEDHFRAAYLLQDVAKEAYQDV 804

  Fly   457 AATSQAPPTAFLPAGSPVDLAKDSPPMWSL---LSEMYRSMLLKTQHQQYN 504
            |.|.||..|:.        :.|.:..|.||   :|:::.:.|     :.||
  Rat   805 AFTPQASQTSV--------IFKGTSGMGSLVYPISQVHSASL-----ESYN 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
discoNP_001033847.1 None
Bnc1NP_001102386.1 C2H2 Zn finger 356..377 CDD:275368 13/20 (65%)
C2H2 Zn finger 384..402 CDD:275368 15/17 (88%)
C2H2 Zn finger 718..739 CDD:275368 6/27 (22%)
C2H2 Zn finger 746..774 CDD:275368 6/42 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352835
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D59377at33208
OrthoFinder 1 1.000 - - FOG0002551
OrthoInspector 1 1.000 - - mtm9145
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15021
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.040

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