DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nipsnap and Nipsnap3a

DIOPT Version :10

Sequence 1:NP_573103.1 Gene:Nipsnap / 32573 FlyBaseID:FBgn0030724 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_082805.1 Gene:Nipsnap3a / 73398 MGIID:1920648 Length:245 Species:Mus musculus


Alignment Length:251 Identity:61/251 - (24%)
Similarity:104/251 - (41%) Gaps:33/251 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SKLLVRKI-EPTKESHSRMLSDKEIIYALHTHNVRPDSMGSYLNNYKTTVALINEKKANLSCELV 98
            |:.||.:: .|....|.:   .:...|...|:.::|.|:..:|.|:|..|.|     .....|||
Mouse    12 SQALVHQVCSPFTTGHRQ---QEGTFYEFCTYYLKPASVEEFLYNFKKNVHL-----RTAHSELV 68

  Fly    99 ASWTVQVGD-MDQCLHLWKYTGGFEKI----DQAKEDLWND----PEYLSLMQERSKFLRSRHLQ 154
            ..|||..|. ::...|:|||.....:.    ..||::.|.:    |....:.::.|:      :.
Mouse    69 GYWTVGFGGRINTVFHIWKYDNFAHRAAVYKALAKDEDWQEQFLIPNLPLIDKQESE------IT 127

  Fly   155 YLLAFSYWPQIASRTGKNIYEMRSYRLTPGTMIEWGNNWARAINYRKHNNEAF----AGFFSQIG 215
            ||:.   |.:|.....:.:||:.::.:.||....||..:.||:|  .|.::.:    ..|.::.|
Mouse   128 YLVP---WCKIGKPPKEGVYELATFLMKPGGPALWGEAFQRAVN--AHADQGYIKLIGVFHAEYG 187

  Fly   216 RLYNVHHIWCYKSLQDRKETREAAWRSPGWDECVAYTVPLIREMHCRVLAPTEFSP 271
            .|..||.:|..::...|...|..|...|.....|..:|..:.......|.|..|||
Mouse   188 LLNRVHVLWWCENADARAAGRRQAHEDPRVVSAVRESVNYLDVQQNMFLIPWSFSP 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NipsnapNP_573103.1 NIPSNAP 174..271 CDD:429767 25/100 (25%)
Nipsnap3aNP_082805.1 NIPSNAP 35..134 CDD:429767 28/112 (25%)
NIPSNAP 144..243 CDD:429767 25/100 (25%)

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