DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nipsnap and Nipsnap3b

DIOPT Version :10

Sequence 1:NP_573103.1 Gene:Nipsnap / 32573 FlyBaseID:FBgn0030724 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_079899.1 Gene:Nipsnap3b / 66536 MGIID:1913786 Length:247 Species:Mus musculus


Alignment Length:224 Identity:59/224 - (26%)
Similarity:97/224 - (43%) Gaps:27/224 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 YALHTHNVRPDSMGSYLNNYKTTVALINEKKANLSCELVASWTVQVGD-MDQCLHLWKYTGGFEK 123
            |...|:.::|.....:|.|:|.:|.|     .....|::..|||:.|. .::..|:||| ..|..
Mouse    37 YEFRTYFLKPSKTNEFLENFKNSVHL-----RTAHSEMIGYWTVEFGGRTNRVFHIWKY-DNFAH 95

  Fly   124 IDQAKEDLWNDPEYLSLMQERSKFL---------RSRHLQYLLAFSYWPQIASRTGKNIYEMRSY 179
            ....::.|..|.|:    |||  ||         :...:.||:.   |.:|.:...:.:||:.::
Mouse    96 RTAVRKALAKDKEW----QER--FLIPNLAFIDKQEVEITYLVP---WCKIGTPPKEGVYELATF 151

  Fly   180 RLTPGTMIEWGNNWARAIN-YRKHNNEAFAG-FFSQIGRLYNVHHIWCYKSLQDRKETREAAWRS 242
            ::.||....|||.:.||:| :.:.......| |.::.|.|..||.:|..:|...|...|..:...
Mouse   152 QMKPGGPALWGNAFKRAVNAHVELGYSTLVGVFHTEYGALNRVHVLWWNESADSRAAGRHWSHED 216

  Fly   243 PGWDECVAYTVPLIREMHCRVLAPTEFSP 271
            |.....|..:|..:.......|.||.|||
Mouse   217 PRVVAAVRESVSYLESQQNTFLIPTSFSP 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NipsnapNP_573103.1 NIPSNAP 174..271 CDD:429767 27/98 (28%)
Nipsnap3bNP_079899.1 NIPSNAP 37..136 CDD:429767 29/113 (26%)
NIPSNAP 146..245 CDD:429767 27/98 (28%)

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