DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nipsnap and pdxp

DIOPT Version :9

Sequence 1:NP_001285316.1 Gene:Nipsnap / 32573 FlyBaseID:FBgn0030724 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001122177.1 Gene:pdxp / 561030 ZFINID:ZDB-GENE-080723-69 Length:308 Species:Danio rerio


Alignment Length:23 Identity:8/23 - (34%)
Similarity:13/23 - (56%) Gaps:7/23 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 LWND-------PEYLSLMQERSK 146
            :||.       ||.:||:::|.|
Zfish    34 IWNGETAVAGAPEVVSLLKQRGK 56

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NipsnapNP_001285316.1 NIPSNAP 174..271 CDD:285252
pdxpNP_001122177.1 PGP_euk 26..300 CDD:273635 8/23 (35%)
Hydrolase_6 26..127 CDD:290083 8/23 (35%)
Hydrolase_like 218..300 CDD:289983
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R944
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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