DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nipsnap and NIPSNAP3B

DIOPT Version :9

Sequence 1:NP_001285316.1 Gene:Nipsnap / 32573 FlyBaseID:FBgn0030724 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_060846.2 Gene:NIPSNAP3B / 55335 HGNCID:23641 Length:247 Species:Homo sapiens


Alignment Length:260 Identity:64/260 - (24%)
Similarity:110/260 - (42%) Gaps:40/260 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LLVRKIEPTKESHSRMLSDK-------------EIIYALHTHNVRPDSMGSYLNNYKTTVALINE 88
            :||.:...||...||.|:.:             ...|...|:.::|.:|.:::.|.|..:.|   
Human     1 MLVLRSGLTKALASRTLAPQVCSSFATGPRQYDGTFYEFRTYYLKPSNMNAFMENLKKNIHL--- 62

  Fly    89 KKANLSCELVASWTVQVGD-MDQCLHLWKYTGGFEKIDQAKEDLWNDPEYLSLMQERSKF----- 147
             :.:.| |||..|:|:.|. .::..|:||| ..|....:.::.|.|..|:    ||:|..     
Human    63 -RTSYS-ELVGFWSVEFGGRTNKVFHIWKY-DNFAHRAEVRKALANCKEW----QEQSIIPNLAR 120

  Fly   148 --LRSRHLQYLLAFSYWPQIASRTGKNIYEMRSYRLTPGTMIEWGNNWARAINYRKHNNEAFAG- 209
              .:...:.||:.   |.::.....:.:||:..:::.||....||:.:.||||  .|.|..:.. 
Human   121 IDKQETEITYLIP---WSKLEKPPKEGVYELAVFQMKPGGPALWGDAFERAIN--AHVNLGYTKV 180

  Fly   210 ---FFSQIGRLYNVHHIWCYKSLQDRKETREAAWRSPGWDECVAYTVPLIREMHCRVLAPTEFSP 271
               |.::.|.|..||.:|..:|...|...|..:...|.....|..:|..:......:|.|..|||
Human   181 VGVFHTEYGELNRVHVLWWNESADSRAAGRHKSHEDPRVVAAVRESVNYLVSQQNMLLIPASFSP 245

  Fly   272  271
            Human   246  245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NipsnapNP_001285316.1 NIPSNAP 174..271 CDD:285252 27/100 (27%)
NIPSNAP3BNP_060846.2 NIPSNAP 37..136 CDD:311781 28/111 (25%)
NIPSNAP 146..245 CDD:311781 27/100 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148022
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2883
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1141024at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.750

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