DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nipsnap and nipsnap1

DIOPT Version :9

Sequence 1:NP_001285316.1 Gene:Nipsnap / 32573 FlyBaseID:FBgn0030724 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001016032.1 Gene:nipsnap1 / 548786 XenbaseID:XB-GENE-984936 Length:279 Species:Xenopus tropicalis


Alignment Length:269 Identity:127/269 - (47%)
Similarity:167/269 - (62%) Gaps:3/269 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLAVGKSNNNAVRSLSTTPSRNDSESWFSKLLVRKIEPTKESHSRMLSDKEI--IYALHTHNVRP 69
            |.:.|.|:......|....|.:...||...|.|||::|.|::||.:||.||.  :|.:..|||:|
 Frog    12 LQSSGPSSGYLPLQLCRYGSDSRDSSWLRSLFVRKVDPRKDAHSTLLSKKETSGLYKMQFHNVKP 76

  Fly    70 DSMGSYLNNYKTTVALINEKKANLSCELVASWTVQVGDMDQCLHLWKYTGGFEKIDQAKEDLWND 134
            :.:..| |.....|........:..|:||.:|....|:.||.:|||:::||:..:......|.|:
 Frog    77 ECLEEY-NRLTEEVLPKLHHDPDYHCDLVGNWNTWYGEQDQAVHLWRFSGGYPALMDCMNKLRNN 140

  Fly   135 PEYLSLMQERSKFLRSRHLQYLLAFSYWPQIASRTGKNIYEMRSYRLTPGTMIEWGNNWARAINY 199
            .|||:..:||||.|.||..|.||.||:|.:.|.|.|.||||:|:|||.|||||||||||||||.:
 Frog   141 KEYLAFREERSKMLLSRRNQLLLEFSFWNEPAPRKGPNIYELRTYRLKPGTMIEWGNNWARAIKH 205

  Fly   200 RKHNNEAFAGFFSQIGRLYNVHHIWCYKSLQDRKETREAAWRSPGWDECVAYTVPLIREMHCRVL 264
            |:.|.||..|||||||.||.|||:|.||.|:.|:|||:|||...||||.|.|||||:|.|..|::
 Frog   206 RQENQEAVGGFFSQIGELYVVHHLWAYKDLESREETRKAAWTKRGWDENVYYTVPLVRNMESRIM 270

  Fly   265 APTEFSPSQ 273
            .|.:.||.|
 Frog   271 IPLKISPLQ 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NipsnapNP_001285316.1 NIPSNAP 174..271 CDD:285252 62/96 (65%)
nipsnap1NP_001016032.1 NIPSNAP 180..277 CDD:285252 62/96 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 148 1.000 Domainoid score I4432
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 260 1.000 Inparanoid score I3033
OMA 1 1.010 - - QHG52951
OrthoDB 1 1.010 - - D1141024at2759
OrthoFinder 1 1.000 - - FOG0003040
OrthoInspector 1 1.000 - - otm49227
Panther 1 1.100 - - LDO PTHR21017
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R944
SonicParanoid 1 1.000 - - X1761
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.110

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