DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nipsnap and nipsnap3a

DIOPT Version :10

Sequence 1:NP_573103.1 Gene:Nipsnap / 32573 FlyBaseID:FBgn0030724 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001005718.1 Gene:nipsnap3a / 448244 XenbaseID:XB-GENE-6050328 Length:255 Species:Xenopus tropicalis


Alignment Length:288 Identity:69/288 - (23%)
Similarity:122/288 - (42%) Gaps:52/288 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKLRNLLAVGKSNNNAVRSLSTTPSRNDSESWFSKLLVRKIEPTKESHSRMLSDKEIIYALHTH 65
            |..||:..|.||        |::|.:.    :|.....:.::..|..:..|  .:....|...|:
 Frog     1 MCSLRSFFAKGK--------LASTAAC----AWRDPAGLAQMRATYATGQR--QEDTTFYEFRTY 51

  Fly    66 NVRPDSMGSYLNNYKTTVALINEKKANLSCELVASWTVQVGDMDQCLHLWKYTGGFE------KI 124
            .|:|..|..::   |.|...|:.:.|:  .|||..||::.|.:::..|:|||....:      |:
 Frog    52 TVKPAMMSDFM---KLTSENIHMRTAH--SELVGYWTLEFGGLNKVFHIWKYDSFAQRAAVRAKL 111

  Fly   125 DQAKEDLWNDPEYLSLMQERSKFLRSRHLQYLLAFSYWPQIASRTGKNIYEMRSYRLTPGTMIEW 189
            .|.::  |.|...|.::....|  :...:.||:.   |.::.....:.:||:.|::..||....|
 Frog   112 AQDRD--WLDKYLLKMLPMLDK--QDNEVTYLVP---WCKVQKPETEGVYELVSFQFKPGGPAVW 169

  Fly   190 GNNWARAINYRKHNNEAFA---GFF-SQIGRLYNVHHIWCYKSLQDRKETREAAWRSPGWDECVA 250
            |:.:..||:  .|.|..:.   |.| ::.|.|..||.:|..::..:|...|..|...       |
 Frog   170 GHAFRAAIS--THVNTGYTKLIGVFNTEYGLLNQVHVLWWNENADNRAAGRHRAHED-------A 225

  Fly   251 YTVPLIRE-------MHCRVLAPTEFSP 271
            ..|..:||       ....::.||:|||
 Frog   226 RVVAAVRESSRFLESQRNLLMLPTKFSP 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NipsnapNP_573103.1 NIPSNAP 174..271 CDD:429767 28/107 (26%)
nipsnap3aNP_001005718.1 NIPSNAP 46..144 CDD:429767 28/109 (26%)
NIPSNAP 154..253 CDD:429767 28/107 (26%)

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