DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nipsnap and nipsnap2

DIOPT Version :9

Sequence 1:NP_001285316.1 Gene:Nipsnap / 32573 FlyBaseID:FBgn0030724 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_571109.1 Gene:nipsnap2 / 30232 ZFINID:ZDB-GENE-991008-18 Length:286 Species:Danio rerio


Alignment Length:266 Identity:132/266 - (49%)
Similarity:173/266 - (65%) Gaps:4/266 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AVGKSNNNAV-RSLSTTPSRNDSESWFSKLLVRKIEPTKESHSRMLSDKE--IIYALHTHNVRPD 70
            |.||.:..|| ||||.:.:|...:|||..|.|||::|.|::||.:|:.||  .:|.:..|||:|:
Zfish    20 ARGKGHATAVIRSLSASHNRPREDSWFKSLFVRKVDPRKDAHSHLLAKKEDNNLYKIQFHNVKPE 84

  Fly    71 SMGSYLNNYKTTVALINEKKANLSCELVASWTVQVGDMDQCLHLWKYTGGFEKIDQAKEDLWNDP 135
            .:.:|....:..:..|:..|| ..||||.:|....|:.||.:|||:|.||:..:.:....|.|:.
Zfish    85 CLEAYNKLCEDVLTNIHTDKA-YPCELVGTWNTWYGEQDQAVHLWRYRGGYPALTEVMSKLKNNK 148

  Fly   136 EYLSLMQERSKFLRSRHLQYLLAFSYWPQIASRTGKNIYEMRSYRLTPGTMIEWGNNWARAINYR 200
            |:|....||.|.|.||..|.||.||:|.:...|.|.||||:|||:|.|||||||||.|||||.||
Zfish   149 EFLEYRSERGKMLLSRRNQLLLEFSFWNEPVPRDGPNIYELRSYQLRPGTMIEWGNYWARAIGYR 213

  Fly   201 KHNNEAFAGFFSQIGRLYNVHHIWCYKSLQDRKETREAAWRSPGWDECVAYTVPLIREMHCRVLA 265
            :||.||..|||||||.||.|||:|.||.||.|::||.|||:..||||.|.||||||:.|..|::.
Zfish   214 QHNREAVGGFFSQIGDLYMVHHLWAYKDLQSREDTRNAAWQHEGWDEVVYYTVPLIQHMESRIMI 278

  Fly   266 PTEFSP 271
            |.:.||
Zfish   279 PLKNSP 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NipsnapNP_001285316.1 NIPSNAP 174..271 CDD:285252 63/96 (66%)
nipsnap2NP_571109.1 NIPSNAP 187..284 CDD:285252 63/96 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 148 1.000 Domainoid score I4420
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1137
Inparanoid 1 1.050 270 1.000 Inparanoid score I2982
OMA 1 1.010 - - QHG52951
OrthoDB 1 1.010 - - D1141024at2759
OrthoFinder 1 1.000 - - FOG0003040
OrthoInspector 1 1.000 - - otm25463
orthoMCL 1 0.900 - - OOG6_103770
Panther 1 1.100 - - O PTHR21017
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R944
SonicParanoid 1 1.000 - - X1761
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1414.010

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