DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nipsnap and nipsnap1

DIOPT Version :9

Sequence 1:NP_001285316.1 Gene:Nipsnap / 32573 FlyBaseID:FBgn0030724 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_571108.2 Gene:nipsnap1 / 30231 ZFINID:ZDB-GENE-991008-17 Length:279 Species:Danio rerio


Alignment Length:272 Identity:124/272 - (45%)
Similarity:165/272 - (60%) Gaps:12/272 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LRNLLAVGKSNNNAVRSLSTTPSRNDSESWFSKLLVRKIEPTKESHSRMLSDKEI--IYALHTHN 66
            |.|:||...:...|.:|         .|.|.|.:...|::..|::||.:||.||.  :|.:..||
Zfish    18 LNNVLAAWLARGFANKS---------DEGWLSSMFAHKVDARKDAHSNLLSKKETSNLYKIQFHN 73

  Fly    67 VRPDSMGSYLNNYKTTVALINEKKANLSCELVASWTVQVGDMDQCLHLWKYTGGFEKIDQAKEDL 131
            |:|:.|..| |.....|........:..||:|.||....|:.||.:|||:|:||:..:.:....|
Zfish    74 VKPEYMEEY-NKLSDEVQKELHHDTDYPCEVVGSWNTWYGEQDQAVHLWRYSGGYPALTECLRKL 137

  Fly   132 WNDPEYLSLMQERSKFLRSRHLQYLLAFSYWPQIASRTGKNIYEMRSYRLTPGTMIEWGNNWARA 196
            ..:..||:..:||||.|.||..|.||.||:|.:...|:|.||||:|||:|.|||||||||:||||
Zfish   138 NLNTAYLAFRKERSKMLLSRRNQLLLEFSFWNEPVPRSGSNIYELRSYQLLPGTMIEWGNHWARA 202

  Fly   197 INYRKHNNEAFAGFFSQIGRLYNVHHIWCYKSLQDRKETREAAWRSPGWDECVAYTVPLIREMHC 261
            |.||:.||||..|||:|||.||.|||:|.||.||.|:|||:|||...|||..|.||:|||::|..
Zfish   203 IKYRQENNEAVGGFFTQIGDLYVVHHLWAYKDLQSREETRKAAWEKEGWDVSVHYTMPLIQKMES 267

  Fly   262 RVLAPTEFSPSQ 273
            |::.|...||.|
Zfish   268 RIMIPMVHSPLQ 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NipsnapNP_001285316.1 NIPSNAP 174..271 CDD:285252 61/96 (64%)
nipsnap1NP_571108.2 NIPSNAP 180..277 CDD:285252 61/96 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581932
Domainoid 1 1.000 148 1.000 Domainoid score I4420
eggNOG 1 0.900 - - E1_KOG2883
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 270 1.000 Inparanoid score I2982
OMA 1 1.010 - - QHG52951
OrthoDB 1 1.010 - - D1141024at2759
OrthoFinder 1 1.000 - - FOG0003040
OrthoInspector 1 1.000 - - otm25463
orthoMCL 1 0.900 - - OOG6_103770
Panther 1 1.100 - - LDO PTHR21017
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1761
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

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