DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nipsnap and Nipsnap1

DIOPT Version :9

Sequence 1:NP_001285316.1 Gene:Nipsnap / 32573 FlyBaseID:FBgn0030724 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_006514638.1 Gene:Nipsnap1 / 18082 MGIID:1278344 Length:287 Species:Mus musculus


Alignment Length:254 Identity:127/254 - (50%)
Similarity:163/254 - (64%) Gaps:11/254 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SRNDSESWFSKLLVRKIEPTKESHSRMLSDKEI--IYALHTHNVRPDSMGSYLNNYKTTVALINE 88
            |::...|||..|.|.|::|.|::||.:||.||.  :|.:..|||:|:.:.:|  |..|...|   
Mouse    39 SKDSEGSWFRSLFVHKVDPRKDAHSTLLSKKETSNLYKIQFHNVKPECLDAY--NSLTEAVL--- 98

  Fly    89 KKANLS----CELVASWTVQVGDMDQCLHLWKYTGGFEKIDQAKEDLWNDPEYLSLMQERSKFLR 149
            .|.:|.    |.||.:|....|:.||.:|||:::||:..:......|.|:.|||...:||||.|.
Mouse    99 PKLHLDEDYPCSLVGNWNTWYGEQDQAVHLWRFSGGYPALMDCMNKLKNNKEYLEFRKERSKMLL 163

  Fly   150 SRHLQYLLAFSYWPQIASRTGKNIYEMRSYRLTPGTMIEWGNNWARAINYRKHNNEAFAGFFSQI 214
            ||..|.||.||:|.:...|.|.||||:|:|:|.|||||||||||||||.||:.|.||..||||||
Mouse   164 SRRNQLLLEFSFWNEPQPRAGPNIYELRTYKLKPGTMIEWGNNWARAIKYRQENQEAVGGFFSQI 228

  Fly   215 GRLYNVHHIWCYKSLQDRKETREAAWRSPGWDECVAYTVPLIREMHCRVLAPTEFSPSQ 273
            |.||.|||:|.||.||.|:|||.||||..||||.|.|||||:|.|..|::.|.:.||.|
Mouse   229 GELYVVHHLWAYKDLQSREETRNAAWRKRGWDENVYYTVPLVRHMESRIMIPLKISPLQ 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NipsnapNP_001285316.1 NIPSNAP 174..271 CDD:285252 64/96 (67%)
Nipsnap1XP_006514638.1 NIPSNAP 188..285 CDD:311781 64/96 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838113
Domainoid 1 1.000 152 1.000 Domainoid score I4310
eggNOG 1 0.900 - - E1_KOG2883
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 263 1.000 Inparanoid score I3069
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52951
OrthoDB 1 1.010 - - D1141024at2759
OrthoFinder 1 1.000 - - FOG0003040
OrthoInspector 1 1.000 - - otm44053
orthoMCL 1 0.900 - - OOG6_103770
Panther 1 1.100 - - LDO PTHR21017
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R944
SonicParanoid 1 1.000 - - X1761
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.800

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