DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nipsnap and Nipsnap2

DIOPT Version :9

Sequence 1:NP_001285316.1 Gene:Nipsnap / 32573 FlyBaseID:FBgn0030724 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_032121.3 Gene:Nipsnap2 / 14467 MGIID:1278343 Length:281 Species:Mus musculus


Alignment Length:258 Identity:118/258 - (45%)
Similarity:167/258 - (64%) Gaps:3/258 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VRSLSTTPSRNDSESWFSKLLVRKIEPTKESHSRMLSDKEI--IYALHTHNVRPDSMGSYLNNYK 80
            :|:::::..|...:||...|.|||::|.|::||.:|:.||.  :|.|..|||:|:.:.:|....:
Mouse    25 LRTVTSSSHRAREDSWLKSLFVRKVDPRKDAHSNLLAKKETSSLYKLQFHNVKPECLDAYNKICQ 89

  Fly    81 TTVALINEKKANLSCELVASWTVQVGDMDQCLHLWKYTGGFEKIDQAKEDLWNDPEYLSLMQERS 145
            ..:..|:|.| ...|.||.:|....|:.||.:|||:|.||:..:.:....|..:.|:::..:.||
Mouse    90 EVLPKIHEGK-QYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNKLKENQEFVNFRKARS 153

  Fly   146 KFLRSRHLQYLLAFSYWPQIASRTGKNIYEMRSYRLTPGTMIEWGNNWARAINYRKHNNEAFAGF 210
            ..|.||..|.||.||:|.:...|.|.||||:|||:|.|||||||||.|||||.:|:.:|||..||
Mouse   154 DMLLSRKNQLLLEFSFWNEPVPRPGPNIYELRSYQLRPGTMIEWGNYWARAIRFRQDSNEAVGGF 218

  Fly   211 FSQIGRLYNVHHIWCYKSLQDRKETREAAWRSPGWDECVAYTVPLIREMHCRVLAPTEFSPSQ 273
            |||||:||.|||:|.||.||.|::.|.|||...||:|.|.||||||:||..|::.|.:.||.|
Mouse   219 FSQIGQLYMVHHLWAYKDLQTREDIRNAAWHKHGWEELVYYTVPLIQEMESRIMIPLKTSPLQ 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NipsnapNP_001285316.1 NIPSNAP 174..271 CDD:285252 60/96 (63%)
Nipsnap2NP_032121.3 NIPSNAP 182..279 CDD:285252 60/96 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838114
Domainoid 1 1.000 152 1.000 Domainoid score I4310
eggNOG 1 0.900 - - E1_KOG2883
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1137
Inparanoid 1 1.050 263 1.000 Inparanoid score I3069
Isobase 1 0.950 - 0 Normalized mean entropy S3667
OMA 1 1.010 - - QHG52951
OrthoDB 1 1.010 - - D1141024at2759
OrthoFinder 1 1.000 - - FOG0003040
OrthoInspector 1 1.000 - - otm44053
orthoMCL 1 0.900 - - OOG6_103770
Panther 1 1.100 - - O PTHR21017
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R944
SonicParanoid 1 1.000 - - X1761
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

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