DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr18 and dscamb

DIOPT Version :9

Sequence 1:NP_573102.1 Gene:dpr18 / 32572 FlyBaseID:FBgn0030723 Length:519 Species:Drosophila melanogaster
Sequence 2:XP_009289749.1 Gene:dscamb / 386937 ZFINID:ZDB-GENE-031118-67 Length:2020 Species:Danio rerio


Alignment Length:460 Identity:86/460 - (18%)
Similarity:152/460 - (33%) Gaps:139/460 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LPLSYNSQTSLSLLRLLTIALVIGSQVQV-----LYTTSVETKSP-----SASEQSRNGENRSLL 74
            :|.|.....|:......|::||.||:..:     ||...|:::..     ..:.....||.|   
Zfish   147 IPASVEEYVSVVSWEKDTVSLVSGSRYLITSTGALYILDVQSEDAVNIYRCTTRHRYTGETR--- 208

  Fly    75 FDDYNKTKSTLSTADYLSATRATLYAFSSQDQDEDHS-QMPIEASNAPHSPIPTKMSRGKIPMET 138
                ....:.|..::.:.:....|..|..::....|. ::|.:||.  |.|...:..|...|:|:
Zfish   209 ----QSNSARLLLSEPVDSAPVILDGFERKEVMVGHRVELPCKASG--HPPPRYRWLRDNSPLES 267

  Fly   139 PGSMEFSSNSLPIKNVGTTDQLTTVTMPTTAFASLK-VDRSTMKQPIDSTRTRNHWTASGFARVT 202
            ......|.:.|.|:....:|..:.|.....:|.:.| |.|..:|||:               :..
Zfish   268 DSRYHQSVSGLLIEATRPSDAGSYVCEVWNSFGNAKVVGRLVVKQPL---------------KAV 317

  Fly   203 ERPRSKHHHEHHWGPFFEEPINSATSGDNLVSAVHLFTEAVLNCRVGMLKDKTVMWVRRTAEKVS 267
            ..||...                    .::.|.|.||      |.|....:..:.|. |.|||: 
Zfish   318 VSPRKVR--------------------GSVGSQVSLF------CSVTGSDEFDITWY-RNAEKI- 354

  Fly   268 LLTVGNVTYSGDPRIRVKFQYPNNWRLLINPTQTEDAGVYMCQVSTHPPRVFTTNLTVLEPPLRI 332
                    |.|   |.|:....||..|::......|.|.|.|                       
Zfish   355 --------YQG---INVRITGINNENLVMEGMAKSDGGAYQC----------------------- 385

  Fly   333 IDEHERDVGDRYYKSG--STVDLQCQISRSFFQKERQTILK-STDSANDAVQKLINETTSELNLI 394
                       :.::|  ||.||.            |.:|: .|.....|..:.:......::|:
Zfish   386 -----------FARNGKMSTQDLV------------QVVLEDGTPKILSAFSEKVVSPNEPISLV 427

  Fly   395 GNVNQTQHKFSGQDLEKYFTKFITWAKDEEPLQGMTNRRLS---VSDVWLTSRISIGDAKLSDSG 456
            .:|..|.            ...:||..|::|:...:|.|:.   .::..:.|.:::...::||.|
Zfish   428 CHVKGTP------------LPTVTWTLDDDPVIKDSNHRMDRIITTEGHVLSYLNVSHTQVSDGG 480

  Fly   457 NYSCS 461
            .|.|:
Zfish   481 VYRCT 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr18NP_573102.1 IG_like 242..325 CDD:214653 18/82 (22%)
Ig <258..326 CDD:299845 16/67 (24%)
IGc2 <417..461 CDD:197706 11/46 (24%)
dscambXP_009289749.1 I-set 132..198 CDD:254352 11/50 (22%)
I-set 225..310 CDD:254352 20/86 (23%)
IGc2 239..300 CDD:197706 14/62 (23%)
IG_like 320..400 CDD:214653 29/164 (18%)
IGc2 328..391 CDD:197706 22/115 (19%)
IG_like 417..501 CDD:214653 15/81 (19%)
Ig 424..498 CDD:143165 15/74 (20%)
IG_like 511..592 CDD:214653
IGc2 518..576 CDD:197706
I-set 595..685 CDD:254352
Ig 612..682 CDD:143165
I-set 689..785 CDD:254352
Ig7_DSCAM 706..785 CDD:143211
IG_like 795..883 CDD:214653
Ig 803..890 CDD:299845
FN3 887..980 CDD:238020
FN3 987..1084 CDD:238020
FN3 1092..1185 CDD:238020
FN3 1190..1279 CDD:238020
IGc2 1302..1367 CDD:197706
FN3 1398..1471 CDD:238020
FN3 1485..1557 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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