DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr18 and dpr3

DIOPT Version :9

Sequence 1:NP_573102.1 Gene:dpr18 / 32572 FlyBaseID:FBgn0030723 Length:519 Species:Drosophila melanogaster
Sequence 2:NP_001014459.2 Gene:dpr3 / 3346208 FlyBaseID:FBgn0053516 Length:522 Species:Drosophila melanogaster


Alignment Length:546 Identity:124/546 - (22%)
Similarity:200/546 - (36%) Gaps:161/546 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GYRTLSPASNAAQTLPLSYNSQTSLSLLRLLTIALVIGSQVQVL----YTTSVETKSPSASEQSR 66
            |..|...|:.||.....:..:.|:.:::.::.:.:.|..|.|..    :...:...:.|..:...
  Fly    78 GATTSVAATAAAAAAATTRAAATTRAVIIIMALVVSIMQQQQQSLLWPFCNGLAAAAASTGQPDD 142

  Fly    67 NGENRSLLFDDYNKTKSTLSTADYLSATRATLYAFSSQDQDEDHSQMPIEASNAPHSPIPTKMSR 131
            :|:.            .||||  :||         |||.|    |..|..||.:..||       
  Fly   143 SGDG------------PTLST--FLS---------SSQSQ----SPSPPAASASASSP------- 173

  Fly   132 GKIPMETPGSMEFSSNSLPIKNVGTTDQLTTVTMPTTAFASLKVDRSTMKQPIDSTRTRNHWTAS 196
                      ..|||.::.   .|...:.|..|..:.||...........| .|:.|.|:     
  Fly   174 ----------SSFSSFAVA---HGPQTEATNHTFKSLAFLDASFGSDLFAQ-TDAKRERS----- 219

  Fly   197 GFARVTERPRSKHHHEHHWGPFFEEPINSATSGDNLVSAVHLF--------------TEAVLNCR 247
                               |...||..::.||     .::.:|              |||::.||
  Fly   220 -------------------GAADEESQDADTS-----QSLPIFDFGMPRNITGRTGHTEAIIKCR 260

  Fly   248 VGMLKDKTVMWVRRTAEKVSLLTVGNVTYSGDPRIRV-KFQYPNNWRLLINPTQTEDAGVYMCQV 311
            |..|.||:|.|:|:  ..:.:||||..||:.|.|.:| :.:....|.|.:.....:|:|:|.|||
  Fly   261 VDSLHDKSVSWIRK--RDLHILTVGTATYTSDKRFQVTESKDSREWTLHVKAPLAKDSGIYECQV 323

  Fly   312 STHPPRVFTTNLTVLE-----------PPLRIIDEHERDVGDRYYKSGSTVDLQCQISRS----- 360
            :|.|.......|.::|           ||            |.::|:||.:.|.|.:.:.     
  Fly   324 NTEPKMSMAFQLNIIEISPDAKAVISGPP------------DLHFKAGSAIILNCLVQQPSVKDI 376

  Fly   361 ----FFQKERQTILKSTDSANDAV-------QKLINETTSELNLIGNVNQTQHKFSGQDLEKYFT 414
                :::.|........|.....:       .:.|.|.||..:::..|          ||:..|.
  Fly   377 GPIYWYRGEHMITPFDADDGQPEIPAGRGEHPQGIPEDTSPNDIMSEV----------DLQMEFA 431

  Fly   415 KFITWAKDEEPLQGMTNRRLSVSDVWLTSRISIGDAKLSDSGNYSCSLGRLFTVIVQVQVLTGEL 479
            ..|..    |...|.|          |.||:.|.:|:.:|:|||:|......:..|.|.|:..|.
  Fly   432 TRIAM----ESQLGDT----------LKSRLRISNAQTTDTGNYTCQPTTASSASVLVHVINDEN 482

  Fly   480 PAAVQHNIGSRTEIYSLAMLGHLLVL 505
            |||:|.:......:..|.:|.|||:|
  Fly   483 PAAMQKSGACPCALGPLQLLLHLLLL 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr18NP_573102.1 IG_like 242..325 CDD:214653 30/83 (36%)
Ig <258..326 CDD:299845 22/68 (32%)
IGc2 <417..461 CDD:197706 13/43 (30%)
dpr3NP_001014459.2 Ig 243..330 CDD:299845 31/88 (35%)
IG_like 243..329 CDD:214653 31/87 (36%)
Ig 350..464 CDD:299845 31/149 (21%)
IG_like <441..477 CDD:214653 14/45 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 42 1.000 Domainoid score I12424
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23279
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

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