DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr18 and Jaml

DIOPT Version :9

Sequence 1:NP_573102.1 Gene:dpr18 / 32572 FlyBaseID:FBgn0030723 Length:519 Species:Drosophila melanogaster
Sequence 2:XP_038938277.1 Gene:Jaml / 315610 RGDID:1562572 Length:379 Species:Rattus norvegicus


Alignment Length:310 Identity:69/310 - (22%)
Similarity:109/310 - (35%) Gaps:89/310 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 VHLFTEAVLNCRVGMLKDK---TVMWVRRTAEKV---------SLLTVGNVTYSGDPRIRVKFQY 288
            ||:...|::.|.|...::|   .|.||....|..         |.|:|....:....|: |....
  Rat    35 VHVGESALMGCVVQSTEEKPVDKVDWVFSKGEHAENEYVLYYYSSLSVPTGRFQNRSRL-VGDLL 98

  Fly   289 PNNWRLLINPTQTEDAGVYMCQVSTHPPRVFTTNLTVLEPPLRIIDEHERD----VGDRYYKSGS 349
            .|:..||:...|..|.|:|.|::........:....:    |.::.|..::    |||       
  Rat    99 RNDGSLLLQDVQKADEGIYTCEIRLKNEGSVSKKFVL----LHVLPEEPKELRVHVGD------- 152

  Fly   350 TVDLQCQISRSFF---QKERQTILKSTDSANDAVQKLINETTSELNLIGNVNQTQHKFSGQDLEK 411
            .:.:.|     ||   ::.|.|.:....|:....|:       |:.|..:.|.....|.|     
  Rat   153 PIQMGC-----FFRSTEERRVTRVNWMFSSGKHAQE-------EIVLSYDFNMHSGTFQG----- 200

  Fly   412 YFTKFITWAKDEEPLQGMTNRRLSVSDVWLTSRISIGD-------AKLSDSGNYSCS--LGRL-- 465
                           ||....|:.     ||..||..|       .|.||.|.|:||  ||:|  
  Rat   201 ---------------QGRFRNRVD-----LTGDISRNDGSIMLQTVKKSDQGVYTCSIYLGKLES 245

  Fly   466 -FTVIVQVQVLTGELPAAVQ---HNIGSRTEIYSLAMLGHLLVLIFLFTC 511
             .|::  :.|:..|.|.::.   ...|.:..|..    |:.||:|....|
  Rat   246 RKTIV--LHVIQDESPRSISTTTETAGKQQGILD----GNQLVIIVGIVC 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr18NP_573102.1 IG_like 242..325 CDD:214653 21/94 (22%)
Ig <258..326 CDD:299845 16/76 (21%)
IGc2 <417..461 CDD:197706 13/50 (26%)
JamlXP_038938277.1 V-set 33..139 CDD:400157 24/108 (22%)
FR2 58..69 CDD:409353 4/10 (40%)
CDR2 70..82 CDD:409353 2/11 (18%)
Ig strand C' 71..77 CDD:409353 0/5 (0%)
Ig strand C' 78..82 CDD:409353 2/3 (67%)
FR3 87..121 CDD:409353 10/34 (29%)
Ig strand D 90..96 CDD:409353 2/6 (33%)
Ig strand E 100..108 CDD:409353 3/7 (43%)
Ig strand F 115..122 CDD:409353 3/6 (50%)
V-set 141..253 CDD:400157 35/157 (22%)
Ig strand A' 144..150 CDD:409353 0/5 (0%)
Ig strand B 152..162 CDD:409353 4/21 (19%)
CDR1 162..169 CDD:409353 1/6 (17%)
Ig strand C 169..176 CDD:409353 1/6 (17%)
FR2 170..181 CDD:409353 1/10 (10%)
CDR2 182..196 CDD:409353 4/20 (20%)
Ig strand C' 183..189 CDD:409353 2/12 (17%)
Ig strand C' 191..196 CDD:409353 1/4 (25%)
FR3 204..238 CDD:409353 12/38 (32%)
Ig strand D 207..213 CDD:409353 3/10 (30%)
Ig strand E 217..225 CDD:409353 1/7 (14%)
Ig strand F 232..238 CDD:409353 3/5 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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