DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr18 and kirre

DIOPT Version :9

Sequence 1:NP_573102.1 Gene:dpr18 / 32572 FlyBaseID:FBgn0030723 Length:519 Species:Drosophila melanogaster
Sequence 2:NP_001245505.1 Gene:kirre / 31292 FlyBaseID:FBgn0028369 Length:956 Species:Drosophila melanogaster


Alignment Length:554 Identity:100/554 - (18%)
Similarity:181/554 - (32%) Gaps:147/554 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RLLTIALVIGSQVQVLYTT--------SVETKSPSASEQSRNGENRSLLFDDYNKTKSTLSTADY 90
            |||.:.|::     ||..|        ..::|...:|:.|.:|::.|       .:.|:.|::..
  Fly     8 RLLVLPLIL-----VLILTLLLQPIAVHAKSKKNKSSQSSHHGDSSS-------SSSSSSSSSGS 60

  Fly    91 LSATRATLYAFSSQDQDE--------DHSQMPIEASNAPHSPIPTKMSRGKIP---METPGSMEF 144
            .||.     |.|:.|:.:        .|..|      .|........||..:|   ||..|::::
  Fly    61 SSAA-----ASSANDESKPKGGDNGGQHFAM------EPQDQTAVVGSRVTLPCRVMEKVGALQW 114

  Fly   145 SSNSLPI---KNVGTTDQLTTVTMPTTAFASLKV------DRSTMKQPIDSTRTRNHWTASGFAR 200
            :.:...:   :|:...::.:.|........||.:      |.:..:..:...........|.||:
  Fly   115 TKDDFGLGQHRNLSGFERYSMVGSDEEGDFSLDIYPLMLDDDAKYQCQVGPGPQGEQGIRSRFAK 179

  Fly   201 VT-----ERPRSKHHHEHHWGPFFEEPINSATSGDNLVSAVHLFTEAVLNC-RVGMLKDKTVMWV 259
            :|     |.|:                   .|.||.||:...  .|..|.| ..|......:.|:
  Fly   180 LTVLVPPEAPK-------------------ITQGDYLVTTED--REIELECVSQGGKPAAEITWI 223

  Fly   260 RRTAEKVSLLTVGNVTYSGDP-----RIRVKFQYPNNWRLLINPTQTEDAGVYMCQVSTHPPRVF 319
            ....   ::||.| :.|..:|     ||..:.      .|.:.|.:......:.||......|.:
  Fly   224 DGLG---NVLTKG-IEYVKEPLADSRRITARS------ILKLAPKKEHHNTTFTCQAQNTADRTY 278

  Fly   320 TTNLTVLE---PPLRIIDEHERDVGDRYYKSGSTVDLQCQISRSFFQKERQTILKSTDSANDAVQ 381
            .:...:||   .|..|:......:.......|:.|.|.||...:..:...:..:.......|...
  Fly   279 RSAKLLLEVKYAPKVIVSVVGGALAGGKIPEGAEVILSCQADANPHELSYRWFINDELMTGDFTT 343

  Fly   382 KLINETTSE-----------LNLIGNVNQT------------QHKFSGQ-DLEKYFTKFITWAKD 422
            |:|....|.           :|.:|...|:            |...|.: ||....:.....|.:
  Fly   344 KMIIHNVSRQYHDAIVKCEVVNAVGKSEQSKKLDISFGPVFRQRPVSVEADLGATVSMRCDVAGN 408

  Fly   423 EEP-LQGMTNRRLSVSDVWLTSRISIGDAKLSDSGNYSC--------SLGRLFTVIVQVQVLTGE 478
            .|| ::.::.....|..|....::.:..   ..:|.|.|        .:|...|:.|:      .
  Fly   409 PEPEIEWISENSDQVVGVAAELKLKVSS---ETAGRYFCKAVVNGFPEIGAEATLYVK------R 464

  Fly   479 LPAAVQH-----NIGSRTEI----YSLAMLGHLL 503
            .|....|     .:|.|.:|    :|:....|:|
  Fly   465 APIITSHKVQFGGVGGRVKIDCLAFSIPKAEHIL 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr18NP_573102.1 IG_like 242..325 CDD:214653 16/88 (18%)
Ig <258..326 CDD:299845 13/72 (18%)
IGc2 <417..461 CDD:197706 8/52 (15%)
kirreNP_001245505.1 Ig 87..183 CDD:299845 16/95 (17%)
IG_like 88..182 CDD:214653 15/93 (16%)
C2-set_2 189..279 CDD:285423 23/120 (19%)
Ig_2 307..379 CDD:290606 12/71 (17%)
I-set 382..462 CDD:254352 14/82 (17%)
IGc2 396..446 CDD:197706 8/52 (15%)
Ig 466..561 CDD:299845 8/33 (24%)
IG_like 478..561 CDD:214653 6/21 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.