DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr18 and Ncam1

DIOPT Version :9

Sequence 1:NP_573102.1 Gene:dpr18 / 32572 FlyBaseID:FBgn0030723 Length:519 Species:Drosophila melanogaster
Sequence 2:XP_038936733.1 Gene:Ncam1 / 24586 RGDID:67378 Length:1136 Species:Rattus norvegicus


Alignment Length:298 Identity:61/298 - (20%)
Similarity:108/298 - (36%) Gaps:77/298 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 CRV-GMLKDKTVMWVRRTAEKVSLLTVGNVTYSGDPRIRVKFQYPNNWRLLINPTQTEDAGVYMC 309
            |:| |..|||.:.|.....||:|         ....||.|.:...::..|.|.....:|||:|.|
  Rat    41 CQVAGDAKDKDISWFSPNGEKLS---------PNQQRISVVWNDDDSSTLTIYNANIDDAGIYKC 96

  Fly   310 QVSTH--PPRVFTTNLTVLEPPLRIIDEHERDVGDRYYKSGSTVDLQCQISRS------FFQKER 366
            .|:..  .....|.|:.:.:..:     .:.....:.:|.|....:.|.:..|      :..|.|
  Rat    97 VVTAEDGTQSEATVNVKIFQKLM-----FKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGR 156

  Fly   367 QTILKSTDS----ANDAVQ----KLINETT---------------SELNLIGNVNQT-QHKFS-- 405
            ..|||....    :|:.:|    |..:|.|               .::.:|.||..| |.:.|  
  Rat   157 DVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIV 221

  Fly   406 ------GQ------DLEKYFTKFITWAKDEEPLQGM---TNRRLSVSDVWLTSRISIGDAKLSDS 455
                  ||      |.:.:....::|.||.||::..   ..:.:...|   :|.::|.:...:|.
  Rat   222 NATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDD---SSELTIRNVDKNDE 283

  Fly   456 GNYSCSLGRLFTVIVQVQVLTGELPAAVQHNIGSRTEI 493
            ..|.|.          .:...||..|::...:.::.:|
  Rat   284 AEYVCI----------AENKAGEQDASIHLKVFAKPKI 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr18NP_573102.1 IG_like 242..325 CDD:214653 23/81 (28%)
Ig <258..326 CDD:299845 17/69 (25%)
IGc2 <417..461 CDD:197706 10/46 (22%)
Ncam1XP_038936733.1 IgI_1_NCAM-1 20..116 CDD:409451 23/83 (28%)
Ig strand B 37..41 CDD:409451 61/298 (20%)
Ig strand C 51..55 CDD:409451 0/3 (0%)
Ig strand E 79..83 CDD:409451 1/3 (33%)
Ig strand F 93..98 CDD:409451 2/4 (50%)
Ig strand G 107..110 CDD:409451 0/2 (0%)
IG_like 124..190 CDD:214653 14/65 (22%)
Ig strand B 135..139 CDD:409353 0/3 (0%)
Ig strand C 148..152 CDD:409353 0/3 (0%)
Ig strand E 172..176 CDD:409353 0/3 (0%)
Ig strand F 186..191 CDD:409353 1/4 (25%)
IgI_3_NCAM-1 211..308 CDD:143207 20/109 (18%)
Ig strand B 231..235 CDD:143207 0/3 (0%)
Ig strand C 244..248 CDD:143207 0/3 (0%)
Ig strand E 271..275 CDD:143207 1/3 (33%)
Ig strand F 285..290 CDD:143207 2/14 (14%)
Ig strand G 298..301 CDD:143207 1/2 (50%)
IgI_NCAM-1 307..413 CDD:143277 1/5 (20%)
Ig strand B 326..330 CDD:143277
Ig strand C 339..343 CDD:143277
Ig strand E 379..383 CDD:143277
Ig strand F 393..398 CDD:143277
Ig strand G 406..409 CDD:143277
Ig_3 422..494 CDD:404760
Ig strand B 433..437 CDD:409353
Ig strand C 446..450 CDD:409353
Ig strand E 473..477 CDD:409353
Ig strand F 487..492 CDD:409353
FN3 509..606 CDD:238020
fn3 619..701 CDD:394996
Herpes_BLLF1 <842..1133 CDD:282904
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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