DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr18 and lsamp

DIOPT Version :10

Sequence 1:NP_573102.1 Gene:dpr18 / 32572 FlyBaseID:FBgn0030723 Length:519 Species:Drosophila melanogaster
Sequence 2:XP_031751462.1 Gene:lsamp / 100124984 XenbaseID:XB-GENE-5759171 Length:368 Species:Xenopus tropicalis


Alignment Length:363 Identity:71/363 - (19%)
Similarity:128/363 - (35%) Gaps:95/363 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 PINSA---TSGDNLVSAVHLFTEAVLNCRVGMLKDKT--VMWVRRTAEKVSLLTVGNVTYSGDPR 281
            |:.|.   .|.||:  .|.....|:|.|   .::|::  |.|:.|:    .::..|:..:|.|||
 Frog    28 PVRSGDFNRSTDNI--TVRQGDTAILRC---FVEDRSSRVAWLNRS----GIIFAGDDKWSLDPR 83

  Fly   282 IRVKFQYPNNWRLLINPTQTEDAGVYMCQVSTHPPRVFTTNLTVLEPPLRIIDEHERDVGDRYYK 346
            :.::.:....:.|.|......|.|.|.|.|.|......|....:::.|.:|    .....|....
 Frog    84 VELEKRSLLEYSLRIQKVDVSDEGPYTCSVQTKQHTKTTQVYLIVQVPPKI----SNISADITVN 144

  Fly   347 SGSTVDLQC---------------------QISRSFFQKER----QTILKSTD------SANDAV 380
            .||.|.|.|                     ..:|.|..:|.    |.|.:...      :||:..
 Frog   145 EGSNVTLMCIAYGRPEPMITWRHLTPTAGTSPARDFEGEEEFLEIQGITREQSGRYECKAANEVA 209

  Fly   381 QKLINETTSELNL--IGNVNQTQHKFSGQ--------------DLEKYFTKFITWAKDEEPLQGM 429
            ...:.:....:|.  |...:::....:|:              |.|        |.||:...:.:
 Frog   210 SADVKQVRVTVNYPPIITESKSNEATTGKQAILRCEASAVPAPDFE--------WYKDDTRSRRI 266

  Fly   430 TNRR-LSVSDVWLTSRISIGDAKLSDSGNYSC----SLGRLFTVIVQVQVLTGELPAAV------ 483
            .:.: |.:.:....|.:.:.:......|||:|    .||...|.:...:.::...|.:.      
 Frog   267 NSAQGLEIRNTGSRSVLMVANVTEEHYGNYTCVAANKLGITNTSLYLYKRVSPTKPMSASERGSN 331

  Fly   484 ---QHNIGSRTEI-------YSLAMLGHLLVLIFLFTC 511
               |:.:|..|.|       .||.::.:||..:|. ||
 Frog   332 VHYQYKVGPGTPIDSATSLAASLWLMANLLFCLFC-TC 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr18NP_573102.1 IG_like 242..325 CDD:214653 21/84 (25%)
Ig strand B 242..246 CDD:409433 2/3 (67%)
Ig strand C 255..264 CDD:409433 3/10 (30%)
Ig strand E 292..296 CDD:409433 1/3 (33%)
Ig strand F 306..311 CDD:409433 2/4 (50%)
Ig <417..474 CDD:472250 12/61 (20%)
lsampXP_031751462.1 Ig 38..128 CDD:472250 24/98 (24%)
Ig strand B 49..53 CDD:409353 2/3 (67%)
Ig strand C 61..65 CDD:409353 1/3 (33%)
Ig strand E 94..98 CDD:409353 1/3 (33%)
Ig strand F 108..113 CDD:409353 2/4 (50%)
Ig strand G 121..124 CDD:409353 1/2 (50%)
Ig_3 131..206 CDD:464046 13/78 (17%)
Ig_3 223..302 CDD:464046 13/86 (15%)

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