DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12395 and spata4

DIOPT Version :10

Sequence 1:NP_573101.1 Gene:CG12395 / 32571 FlyBaseID:FBgn0030722 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_001004013.1 Gene:spata4 / 445563 ZFINID:ZDB-GENE-050417-153 Length:224 Species:Danio rerio


Alignment Length:110 Identity:35/110 - (31%)
Similarity:59/110 - (53%) Gaps:4/110 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EVNKWMQQNSIS--TQRLRREFSDVLPLAEIFKRDYPRLVDLFNYPKKSSVQLKLANWETFNFKV 78
            ||.||:|...:|  .:.:||:||:...:||||...:||...:.::...:|:..|.:||.... |.
Zfish    15 EVLKWLQSLDLSFFPKNVRRDFSNGYLVAEIFSWYFPRDFQMHSFDNGTSLAAKQSNWSQIE-KF 78

  Fly    79 LSKLNMTLTKDFMEQMANGVSGAAEVMLHEVIR-LEKRQRLAEQR 122
            ..|.|::|.|:.::...:...||||:::.|:.. |..|...|.||
Zfish    79 FVKQNISLVKEMIDGTIHCKPGAAELLVQEIYTILTNRSIQAIQR 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12395NP_573101.1 CH_2 17..106 CDD:461871 28/90 (31%)
spata4NP_001004013.1 CH_2 16..105 CDD:461871 28/89 (31%)

Return to query results.
Submit another query.