Sequence 1: | NP_001285314.1 | Gene: | vap / 32569 | FlyBaseID: | FBgn0003969 | Length: | 954 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006524298.1 | Gene: | Syngap1 / 240057 | MGIID: | 3039785 | Length: | 1407 | Species: | Mus musculus |
Alignment Length: | 658 | Identity: | 164/658 - (24%) |
---|---|---|---|
Similarity: | 273/658 - (41%) | Gaps: | 145/658 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 334 GHSLNHPVVNGIQPEFNQQYVVEKAAEKIYATLRECRDQIGLKKIKGIKHHGHLNKKSDKTTKWK 398
Fly 399 QL---YFALINDGSETQLCFYDNPKKTKPKGLIDLSCA------------YLYQCHDSLWERPYC 448
Fly 449 FQIVERALPCLATVTYLCAPSQESYVEWINSLKAQCDSQLSRAQK--KVSRLRELRCLNLHVLEA 511
Fly 512 HRLPFKLVPHPYCSISLNQVKVGKTRVKIAPEPV------WEEEFVLDDVPPDVVSLTITLI--S 568
Fly 569 RGKRGKDSE--VAELTIDLSSLKNGQETEGWYQLT------GMTPMGEWG--------------- 610
Fly 611 --SLRLRMRYLDDLIMPCEEYSPLQQLLLESELYAVKALAELCH--------NDRVPLATALLRV 665
Fly 666 FRQEKRETELIRMLCQAEVTRENETTTL-FRGASLATTLMDLYMRTECSGFLQSAVSETVQRILE 729
Fly 730 SKQSAELNPTKMDVNDDACTNAEF------LLQILDLVTQSIFTSPDACPRNVRFICSCLQKAVM 788
Fly 789 AKWPTERL---------VRTRVVSGFIFLRLLCPALLNPRQFGLVSETPPMAATRSLVMVAKCLQ 844
Fly 845 NLANLIEFGGKEQYMEVVNPFILKNKERMIVFLDQLSSVNDPNQPLGMFVEQSTNLNS----QDT 905
Fly 906 GRELATLH 913 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
vap | NP_001285314.1 | SH2_Nterm_RasGAP | 64..166 | CDD:198216 | |
SH3_RasGAP | 183..241 | CDD:212722 | |||
SH2_Cterm_RasGAP | 252..326 | CDD:198217 | |||
PH_RASA1 | 379..484 | CDD:270080 | 20/119 (17%) | ||
C2_Ras_p21A1 | 499..622 | CDD:176045 | 42/155 (27%) | ||
RasGAP | 620..954 | CDD:413381 | 88/322 (27%) | ||
Syngap1 | XP_006524298.1 | PH_SynGAP | 122..313 | CDD:270178 | 42/214 (20%) |
C2_SynGAP_like | 252..414 | CDD:175980 | 44/166 (27%) | ||
RasGAP_DAB2IP | 405..728 | CDD:213338 | 90/325 (28%) | ||
DUF3498 | 718..1292 | CDD:371844 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3508 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D44624at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |