DRSC/TRiP Functional Genomics Resources

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Protein Alignment vap and rasal2

DIOPT Version :9

Sequence 1:NP_001285314.1 Gene:vap / 32569 FlyBaseID:FBgn0003969 Length:954 Species:Drosophila melanogaster
Sequence 2:XP_004914087.1 Gene:rasal2 / 100379974 XenbaseID:XB-GENE-5795955 Length:1279 Species:Xenopus tropicalis


Alignment Length:668 Identity:152/668 - (22%)
Similarity:290/668 - (43%) Gaps:96/668 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 LDAVINRYRKEQIVEGHSLNHPVVNGIQPEFNQQYVVEK-AAEKIYATLRECRDQIGLKKIKGIK 382
            |:....|..:.:.:.|.|.:.. .|.:.|.....:.|.. .::::..:::..:.|..|.:....:
 Frog   143 LEVPAERSPRRRSISGTSTSDK-TNAMDPANTSPFKVSGFFSKRLKGSIKRTKSQSKLDRNTSFR 206

  Fly   383 HHGHLNKKSDKT-----TKWKQLYFALINDGSETQLCFYDNPKKTKPKGLIDLSCAYLYQCHDSL 442
            .......:||::     .|..:.:.:|::.||..:........|...|.|           |.|:
 Frog   207 LPSLRPAESDRSRGLPKLKESRSHESLLSPGSAVEALDLGTEDKILVKPL-----------HSSI 260

  Fly   443 WERPYCFQIVERALPCLATVTYLCAPSQESYVEWINSLKAQCDSQLSRAQKKVSRLRELRCLNLH 507
            ..:.:||::...:    .:..:.|:.:.|. .:|:.:|:..........::..:.||      |.
 Frog   261 LGQDFCFEVTYSS----GSKCFSCSSAAER-DKWMENLRRTVQPNKDNCRRAENVLR------LW 314

  Fly   508 VLEAHRL-PFKLVPHPYCSISLNQVKVGKTRVKIAPEPV-WEEEFVLDDVPPDVVSLTITLI--- 567
            ::||..| |.|..   :|.:.|:.....:|..|...:.: |.|.|....:|| :.::|:.:.   
 Frog   315 IIEAKDLAPKKKY---FCELCLDDTLFARTTSKTKADNIFWGEYFEFYGLPP-LHNITVHIYKDV 375

  Fly   568 -SRGKRGKDSEVAELTIDLSSLKNGQETEGWYQLTGMTPMGEWG-----SLRLRMRYLDDLIMPC 626
             .:.|:.|::.|..:.|.:.|:...|..|.||.::  ||....|     |:|::.||....|:|.
 Frog   376 EKKKKKDKNNYVGLVNIPMISVTGRQFVEKWYPVS--TPTANKGKTVGPSIRIKSRYQTITILPM 438

  Fly   627 EEYSPLQQLLLESELYAVKALAELCH-NDRVPLATALLRVFRQEKRETELIRMLCQAEVTRENET 690
            |:|....:.:..:.......|..:.. .::..:|.||:.:.:...|..:.:..|..:||.|..|.
 Frog   439 EQYKEFAEFITINYTMLCSVLEPVISVRNKEEMACALVHILQSTGRAKDFLTDLVMSEVDRCGEH 503

  Fly   691 TTL-FRGASLATTLMDLYMRTECSGFLQSAVSETVQRILESKQSAELNPTKMDVNDDACTNAEF- 753
            ..| ||..:|||..::.|::.....:|..|:.|.::.:.||.::.|::|:|       |:::|. 
 Frog   504 DVLIFRENTLATKAIEEYLKLVGQKYLHDALGEFIKALYESDENCEVDPSK-------CSSSELS 561

  Fly   754 -----LLQILDLVTQSIFTSPDACPRNVRFICSCLQKAVMAKWPTERL------VRTRVVSGFIF 807
                 |....:|....|..|....||.:        |.|.|.|..:.:      :..|::|..:|
 Frog   562 DHQSNLKMCCELAFCKIINSYCVFPREL--------KEVFASWKQQCINRGKQDISERLISASLF 618

  Fly   808 LRLLCPALLNPRQFGLVSETPPMAATRSLVMVAKCLQNLANLIEFGGKEQYMEVVNPFILKNKER 872
            ||.||||:::|..|||:.|.|....:|:|.::||.:|||||..:||.||:||..:|.|:......
 Frog   619 LRFLCPAIMSPSLFGLMQEYPDDRTSRTLTLIAKVIQNLANFAKFGNKEEYMAFMNDFLEHEWGG 683

  Fly   873 MIVFLDQLSSVNDPNQPLGM--FVEQSTNLNSQDTGRELATLHHICVSHSQELHELSNIL---SI 932
            |..||.::|:.:..:...|.  ::         |.||||:.||.:......:|.:..|..   ::
 Frog   684 MKRFLQEISNPDTISNTPGFEGYI---------DLGRELSVLHSLLWEVVSQLDKGENSFLQATV 739

  Fly   933 KK-------LVTVTDMLT 943
            :|       |..:|..||
 Frog   740 EKLGPLPRILADITKSLT 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vapNP_001285314.1 SH2_Nterm_RasGAP 64..166 CDD:198216
SH3_RasGAP 183..241 CDD:212722
SH2_Cterm_RasGAP 252..326 CDD:198217 1/6 (17%)
PH_RASA1 379..484 CDD:270080 17/109 (16%)
C2_Ras_p21A1 499..622 CDD:176045 33/133 (25%)
RasGAP 620..954 CDD:413381 92/350 (26%)
rasal2XP_004914087.1 PH-like 173..357 CDD:388408 34/208 (16%)
C2_SynGAP_like 299..438 CDD:175980 35/150 (23%)
RasGAP_DAB2IP 429..759 CDD:213338 94/353 (27%)
DUF3498 749..1241 CDD:371844 4/9 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D44624at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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