DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8939 and Mrm2

DIOPT Version :9

Sequence 1:NP_573099.1 Gene:CG8939 / 32568 FlyBaseID:FBgn0030720 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_080786.1 Gene:Mrm2 / 68017 MGIID:1915267 Length:246 Species:Mus musculus


Alignment Length:201 Identity:74/201 - (36%)
Similarity:104/201 - (51%) Gaps:15/201 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNM---------P 67
            ||.|.:.||....|.|:||||:::|.|...|:.....||..||||.|.|||.|.:         |
Mouse    40 KDPFVKAAKVESYRCRSAFKLLEMNEKHQILRPGLRVLDCGAAPGAWSQVAVQRVNATGADSSSP 104

  Fly    68 VSSIVIGVDLFPIRPIAGCIGLV-EDITTEKCRQSLTKELQSWKADVVLHDGAPNVG--RNWLYD 129
            | ..|:||||..|.|:||...|. .|:|..:..|.:.:.|.|.:|||:|.|.|||..  |:..:|
Mouse   105 V-GFVLGVDLLHIFPLAGATFLCPADVTDPRTFQKILELLPSRRADVILSDMAPNATGIRDLDHD 168

  Fly   130 AYQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIF 194
            ....:||||  :.::...|..||..:.|.:.....:.|...|.|.|:.....||.||||||:|::
Mouse   169 KLISLCLTL--VDMAVDILHPGGTLLCKTWAGSKSHLLQKRLTQEFQSTRVVKPEASRKESSEVY 231

  Fly   195 VVCQGY 200
            ::...|
Mouse   232 LLATQY 237

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG8939NP_573099.1 RlmE 8..203 CDD:223370 74/201 (37%)
DUF3381 233..366 CDD:288694
Spb1_C 611..803 CDD:285075
Mrm2NP_080786.1 RlmE 33..239 CDD:223370 74/201 (37%)
S-adenosyl-L-methionine binding. /evidence=ECO:0000250|UniProtKB:Q9UI43 83..86 2/2 (100%)