DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8939 and ftsj1

DIOPT Version :9

Sequence 1:NP_573099.1 Gene:CG8939 / 32568 FlyBaseID:FBgn0030720 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_001007385.2 Gene:ftsj1 / 492512 ZFINID:ZDB-GENE-041114-83 Length:323 Species:Danio rerio


Alignment Length:232 Identity:88/232 - (37%)
Similarity:124/232 - (53%) Gaps:15/232 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKTKVGKTRKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQN 65
            ||:.:   |.::|.:|:||||.|.|:|:||||:||:.:|...:.....:|||||||.|.||..:.
Zfish     1 MGRSS---KDKRDIYYRLAKEEGWRARSAFKLLQLDEEFKLFKGVSRAVDLCAAPGSWSQVLSRK 62

  Fly    66 M-----PVSSIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRN 125
            :     .....::.|||..:.|:.|...:..|||.....:.:.:..:...||:|:.||||:|...
Zfish    63 LRGKDKSEEVKIVAVDLQAMAPLPGVTQIQGDITKISTAEEIIRHFEGESADLVVCDGAPDVTGL 127

  Fly   126 WLYDAYQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKES 190
            ...|.|.|..|.|.||.::|..|:.||.||.|:||.||...|...||..|..|...||.:||..|
Zfish   128 HDVDEYIQAQLLLAALNITTHVLKPGGNFVAKIFRGKDVTLLYSQLKIFFSFVTCAKPPSSRNSS 192

  Fly   191 AEIFVVCQGYLAPDHIDPR----LLDSKYVFEELDLD 223
            .|.|||||.|..|:...|.    |||..|   ::||:
Zfish   193 IEAFVVCQNYSPPEGYVPNMSNPLLDHSY---DVDLN 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8939NP_573099.1 RlmE 8..203 CDD:223370 78/199 (39%)
DUF3381 233..366 CDD:288694
Spb1_C 611..803 CDD:285075
ftsj1NP_001007385.2 RlmE 5..206 CDD:223370 78/203 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0293
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1362679at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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