DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8939 and ftsj3

DIOPT Version :9

Sequence 1:NP_573099.1 Gene:CG8939 / 32568 FlyBaseID:FBgn0030720 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_001292397.1 Gene:ftsj3 / 321247 ZFINID:ZDB-GENE-030131-9828 Length:838 Species:Danio rerio


Alignment Length:877 Identity:373/877 - (42%)
Similarity:519/877 - (59%) Gaps:106/877 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKTKVGKTRKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQN 65
            ||||.|||||||||||.||||||.|||::||||||||||.|||:::..:|||||||||:|||.:.
Zfish     1 MGKKLKVGKTRKDKFYHLAKETGYRSRSSFKLIQLNRKFQFLQKARALVDLCAAPGGWLQVASKF 65

  Fly    66 MPVSSIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWLYDA 130
            |||||:||||||.||:||...:.|.||||||||||:|.||||:||.||||:|||||||.||.:||
Zfish    66 MPVSSLVIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKVDVVLNDGAPNVGANWQHDA 130

  Fly   131 YQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIFV 195
            :.|..|||.||||:.:||..||.|:|||||||||..|:|:.:|.||||.||||.|||.|||||||
Zfish   131 FSQANLTLMALKLACEFLAKGGTFITKVFRSKDYQPLMWIFQQFFKKVQATKPQASRNESAEIFV 195

  Fly   196 VCQGYLAPDHIDPRLLDSKYVFEELDLDAKKKSSLLHPEKQKRIKAEGYTAQDIALRNDLAATEF 260
            ||||:||||.||.:..|.|:.|:|:|:..|....|::   :|:.|||||:..|:.|.:....|||
Zfish   196 VCQGFLAPDKIDNKFFDPKHAFKEVDVQVKTVKELVN---KKKPKAEGYSDGDLTLYHKFTITEF 257

  Fly   261 LKAENALAALQGIGSIRIDDQRIANHKKTTPEILECCKDLKVLGRKDIKGLVQWWKDVRELFVEK 325
            |||||.:..|.....|..||..:.:|..|:.||.|||.|:||||||:::.|:.|...:|:...:|
Zfish   258 LKAENPVDFLSKANEITFDDPLLESHPLTSAEIRECCSDVKVLGRKELRLLLSWRSKLRKFLAKK 322

  Fly   326 ---ETPLVVGNAA-----------DEKPKPLTQAEIEDMEDAELQTQIETIVEEEKKDLKRKRKK 376
               |...:...|:           :.|.|...:.:.|:.||..::.::..:..||..:||||:||
Zfish   323 LRQEAKQLDQEASSDDEQSDTDEKESKKKKSEEKKEEEDEDEAMEKKLTELKAEEFAELKRKKKK 387

  Fly   377 TLKTKAKLHEKMNLNMVIKG----DDGPVEEMEHEIFDLKNIRTSAELDELLDVQPDFAVDESQP 437
            .||.:.|..|::.|.|.:.|    |.|     :..:|.|.:||.|..|.:|  .|.|.:..::..
Zfish   388 LLKERRKQRERVELKMDLPGVSIADAG-----DSSMFSLGSIRKSQGLHQL--AQGDMSAADALL 445

  Fly   438 EETKLPKYKYFDKDEGNINDDLNYDDDNDEEQSEASD-DEDQINDKQGLGLSDDDNDEGNAKGKN 501
            |:.        ::::.:::|    ::..||..|.||| |.|.:.:.|       ..:|...|.|.
Zfish   446 EDD--------EQEDVHLSD----EEQEDERMSLASDLDSDDLQEIQ-------QKEEQMLKNKP 491

  Fly   502 KRKKR------------SENPLIKSNDFRDKNTKREQRVQLWYEKDVLQNIQSDDDEETYDLNNL 554
            |:||:            ::|.|:.  :...|:.::|:...:|:.||:...:..:||.:..:    
Zfish   492 KKKKKVSFEQQDDGDEDNKNELLV--ELEGKDERKERETSMWFSKDIFAELDLNDDTDAMN---- 550

  Fly   555 AKEFKAKGVAVLGESTLTPDANEEVVQGKKAKRRARHETATKDSSSESSESED-DANEDSDGEQ- 617
              |.|...:...|.........||..:.||.:::    .||  .|.|..|:|| |:::.||.|: 
Zfish   551 --ELKQTQILQTGRGKKRKAQQEEEAEPKKPEQK----VAT--PSQEVKEAEDSDSDDSSDDERE 607

  Fly   618 --------PAAGTNA----------------KKVRLSENE-MALGALLTRSKKTRRDLIDAAWNR 657
                    .|.|||.                |:.|:.:.| :||||.:..|||..|||||.:::|
Zfish   608 IAQMKQASAAVGTNGAEENDNIQVIPVEKTNKRARVLDAEGLALGAQIATSKKRERDLIDGSFHR 672

  Fly   658 YAFNDE--NVPVWFKLDEDEHMTKPTPVPKELTAEYQRKLQEVNVRPIKKVMEAKARKHRRATKR 720
            :|.:::  .||.||..||.:|..:|.||.|::..||::|.:|:|.|||::|.||||||.||..|:
Zfish   673 FANSEDMTEVPAWFVDDEKKHRKRPVPVTKDMVEEYKQKWKEINARPIRRVAEAKARKKRRTLKK 737

  Fly   721 LAKAKKMAEKIMENSDATNHEKSKQLKKVYKKA--QEKKKEVTYVVAKKQTAARRARRPAGVKGR 783
            :.:|||.||.::...|.:..||..|||.:||||  .::|:||||||||| ...||.||||||||.
Zfish   738 MEQAKKKAEAVVNTVDISEREKMAQLKSIYKKAGVGKEKREVTYVVAKK-GVGRRVRRPAGVKGA 801

  Fly   784 YKVVDPREKKDKRSMDAKKRREKGSKGRKGKG 815
            :||||.|.|||.|:...|..|.:|..||..||
Zfish   802 FKVVDGRMKKDTRAAQRKDERGRGKGGRGSKG 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8939NP_573099.1 RlmE 8..203 CDD:223370 139/194 (72%)
DUF3381 233..366 CDD:288694 45/146 (31%)
Spb1_C 611..803 CDD:285075 98/221 (44%)
ftsj3NP_001292397.1 RlmE 4..203 CDD:223370 142/198 (72%)
DUF3381 233..377 CDD:288694 45/143 (31%)
Spb1_C 624..819 CDD:285075 90/195 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579435
Domainoid 1 1.000 257 1.000 Domainoid score I1988
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5451
Inparanoid 1 1.050 623 1.000 Inparanoid score I845
OMA 1 1.010 - - QHG53535
OrthoDB 1 1.010 - - D1362679at2759
OrthoFinder 1 1.000 - - FOG0005092
OrthoInspector 1 1.000 - - oto39136
orthoMCL 1 0.900 - - OOG6_101655
Panther 1 1.100 - - LDO PTHR10920
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3614
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.910

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