back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG8939 and MRM2

DIOPT Version :9

Sequence 1:	NP_573099.1	Gene:	CG8939 / 32568	FlyBaseID:	FBgn0030720	Length:	817	Species:	Drosophila melanogaster
Sequence 2:	NP_037525.1	Gene:	MRM2 / 29960	HGNCID:	16352	Length:	246	Species:	Homo sapiens

Alignment Length:	200	Identity:	72/200 - (36%)
Similarity:	104/200 - (52%)	Gaps:	13/200 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly    12 KDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNM------PVSS 70
            :|.|.:.||....|.|:||||:::|.:...|:.....||..||||.|.|||.|.:      |.|.
Human    40 RDPFVKAAKVESYRCRSAFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSP 104

  Fly    71 I--VIGVDLFPIRPIAGCIGLV-EDITTEKCRQSLTKELQSWKADVVLHDGAPNVG--RNWLYDA 130
            :  |:||||..|.|:.|...|. .|:|..:..|.:.:.|...:|||:|.|.|||..  |:..:|.
Human   105 VGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDR 169

  Fly   131 YQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIFV 195
            ...:||||  |.::...|:.||.|:.|.:.......|...|.:.|:.|...||.||||||:|::.
Human   170 LISLCLTL--LSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKPEASRKESSEVYF 232

  Fly   196 VCQGY 200
            :...|
Human   233 LATQY 237

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.