DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8939 and spb1

DIOPT Version :9

Sequence 1:NP_573099.1 Gene:CG8939 / 32568 FlyBaseID:FBgn0030720 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_593129.1 Gene:spb1 / 2542112 PomBaseID:SPAC1687.11 Length:802 Species:Schizosaccharomyces pombe


Alignment Length:860 Identity:322/860 - (37%)
Similarity:488/860 - (56%) Gaps:106/860 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGK-KTKVGKTRKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQ 64
            ||| :.|..|.|.||:|:||||.|.||||||||:|||:|:.||::::|.:|||||||||:|||.:
pombe     1 MGKSQKKTAKGRLDKWYKLAKEQGYRSRAAFKLVQLNQKYSFLEKAKVIIDLCAAPGGWLQVASK 65

  Fly    65 NMPVSSIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWLYD 129
            .....|:::||||.||:||..|...|||||::|||..|...|::|||||||||||||||..||.|
pombe    66 TCKPGSLIVGVDLAPIKPIPNCHTFVEDITSDKCRSQLRGYLKTWKADVVLHDGAPNVGSAWLQD 130

  Fly   130 AYQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIF 194
            ||.|..|.|.::||:.:||..||.||||||||:|||.||||.||||.||.||||.:||..|||||
pombe   131 AYGQAQLVLMSMKLACEFLVAGGTFVTKVFRSRDYNNLLWVFKQLFNKVEATKPPSSRNVSAEIF 195

  Fly   195 VVCQGYLAPDHIDPRLLDSKYVFEEL-----DLDAKKKSSLLHPEKQKRIKAEGYTAQDIALRND 254
            |||:||.||..:|||..|.:.||||:     ::|||    :.||||:||.: |||...|..|...
pombe   196 VVCRGYKAPKKLDPRFTDPRTVFEEVQEPVTNVDAK----VFHPEKRKRSR-EGYADDDYTLHKT 255

  Fly   255 LAATEFLKAENALAALQGIGSIRI--DD---QRIANHKKTTPEILECCKDLKVLGRKDIKGLVQW 314
            :.|:||:.|.:.:..|.....|..  ||   ||:.|...||.|||.||.||:|||:|:.:.:::|
pombe   256 VLASEFVTANDPIQILGTSAEIVFPKDDEECQRLYNLDVTTEEILLCCSDLQVLGKKEFRDILRW 320

  Fly   315 WKDVRELFVEKETPLVVGNAADEKPKPLTQAEIEDMEDAE-LQTQIETIVEEEKKDLKRKRKKTL 378
            ...:|:       .:.:|...:::.|.:.: ||.:|::.| |..:::.:.|.|:..|||:|:|..
pombe   321 RLKIRD-------EMGIGKKVEDEQKTVVE-EIPEMDEEERLDQELQDLSEAERVKLKRERRKAN 377

  Fly   379 KTKAKLHEKMNLNMVIKGDDGPVEEMEHE------IFDLKNIRTSAELDELLDVQPDFAVDESQP 437
            :.|.:...:|.:.|:...|.|    :|||      :|.|    .:||...|.::           
pombe   378 QRKQREIVRMQMGMLAPMDIG----LEHEAMGEDSLFGL----ATAEKHGLKEL----------- 423

  Fly   438 EETKLPKYKYFDKDEGNINDDLNYDDDNDEEQSEASDD-----------EDQINDKQGLGLSDDD 491
            |...||..:..| :|.:.::::.||.|::.::.||..|           |..:..:......|.|
pombe   424 ENGTLPVTESVD-EEVSTDNEVEYDSDDERDRLEADLDSMYSDYTKRKAESDVKYRVKKARGDLD 487

  Fly   492 NDEGNAKGKNKRKKRSENPLIKSN-----------DFRDKNTKRE---QRVQLWYEKDVLQNIQ- 541
            ::|.|  |.:...:..::.:.::|           ...||.:.::   ::.::::::|:...|: 
pombe   488 DEEWN--GIDNGTESDDSQIAETNFATPDKDRLTTSLLDKGSTKDGLSRKARMFFDQDIFDGIED 550

  Fly   542 SDDDEETYDLNNLAKEFKAKGVAVLGESTLTPDANEEVVQGKKAKRRARHETATKDSSSESSESE 606
            :|.|.|...:|..|.:.:        |:.|....|::..:|.:::....|......:|:.  :.:
pombe   551 ADADVEIMSMNRAAIKKR--------EAELASQNNDDGSKGDQSEDSNDHIEVVPVASAH--DED 605

  Fly   607 DDANEDSDGEQPAAGTNAKKVRLSENEMALGALLTRSKKTRRDLIDAAWNRYAF-NDENVPVWFK 670
            ||.|.|||.::    .|.:.|  :...|.|...:...:|::.||||..:||::| :.|.:|.|| 
pombe   606 DDWNSDSDNDE----NNVEIV--TAEAMTLAQDIASRRKSKADLIDEGYNRWSFQSKEGLPDWF- 663

  Fly   671 LDEDEHMTKPT-PVPKELTAEYQRKLQEVNVRPIKKVMEAKARKHRRATKRLAKAKKMAEKIMEN 734
            |||:..:.||. |:.||.....:.|::.:|.||||||:||:.||..|..|||.:..|.||.|.|:
pombe   664 LDEETTVNKPNKPITKEAVLALREKMKALNARPIKKVLEAQGRKKMRTIKRLQRVAKKAEGISES 728

  Fly   735 SDATNHEKSKQLKKVYKKAQEKKKEV--TYVVAKKQTAARRARRPAGVKGRYKVVDPREKKDKRS 797
            .|.|..||:|::.::..:|.:.|.:.  |.||||......:: ||.||||:||:||.|.|||.| 
pombe   729 GDMTESEKAKEISRLVSRATKSKPKAKPTLVVAKGPNKGLKS-RPKGVKGKYKMVDSRMKKDLR- 791

  Fly   798 MDAKKRREKGSKGRK 812
              |:||..|  |||:
pombe   792 --AQKRLAK--KGRR 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8939NP_573099.1 RlmE 8..203 CDD:223370 123/194 (63%)
DUF3381 233..366 CDD:288694 44/138 (32%)
Spb1_C 611..803 CDD:285075 76/195 (39%)
spb1NP_593129.1 RlmE 1..205 CDD:223370 128/203 (63%)
DUF3381 235..385 CDD:288694 51/158 (32%)
Spb1_C 588..798 CDD:285075 83/222 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 235 1.000 Domainoid score I479
eggNOG 1 0.900 - - E1_COG0293
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 487 1.000 Inparanoid score I260
OMA 1 1.010 - - QHG53535
OrthoFinder 1 1.000 - - FOG0005092
OrthoInspector 1 1.000 - - oto101449
orthoMCL 1 0.900 - - OOG6_101655
Panther 1 1.100 - - LDO PTHR10920
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1375
SonicParanoid 1 1.000 - - X3614
TreeFam 1 0.960 - -
1312.860

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