DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8939 and F45G2.9

DIOPT Version :10

Sequence 1:NP_573099.1 Gene:CG8939 / 32568 FlyBaseID:FBgn0030720 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_499776.1 Gene:F45G2.9 / 185813 WormBaseID:WBGene00009735 Length:214 Species:Caenorhabditis elegans


Alignment Length:194 Identity:63/194 - (32%)
Similarity:99/194 - (51%) Gaps:8/194 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMPVSSIVIGVDL 77
            |:|...|:|...|:|:|||||::|.||.||:.....:|:..|||.|:||..|..| :....||||
 Worm    21 DEFAVKAREHNYRARSAFKLIEINEKFKFLKPESTVIDIGCAPGSWLQVVVQKCP-NGYASGVDL 84

  Fly    78 FPIRPIAGC-IGLVEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWLYDAYQQICLTLNAL 141
            ..:.||.|. |..:.|||....:..:.::|...:.||||.|.|||...:...|..:.|.|..:..
 Worm    85 QNVLPIRGADILSLSDITDPAVKLKIREKLAHRQVDVVLSDMAPNPTGDNATDHLRLIELCRSVF 149

  Fly   142 KL-----STQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIFVVCQGY 200
            :|     ..:.::| |.::.|::........:..|...|..|...||:|.|..|||:::.|:.:
 Worm   150 RLFSVENEIELVKN-GVYLCKIWDGSARAEFVRELSDRFSTVKTVKPTACRDNSAELYLFCRNF 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8939NP_573099.1 RlmE 1..200 CDD:440062 63/192 (33%)
DUF3381 233..366 CDD:463375
Spb1_C 610..803 CDD:462264
F45G2.9NP_499776.1 RlmE 1..213 CDD:440062 63/194 (32%)
Blue background indicates that the domain is not in the aligned region.

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