DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8939 and R74.7

DIOPT Version :10

Sequence 1:NP_573099.1 Gene:CG8939 / 32568 FlyBaseID:FBgn0030720 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_497843.1 Gene:R74.7 / 175543 WormBaseID:WBGene00011281 Length:337 Species:Caenorhabditis elegans


Alignment Length:387 Identity:113/387 - (29%)
Similarity:180/387 - (46%) Gaps:84/387 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGKTRKDK---FYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNM-- 66
            :|||.:||   :|:||||...|:|:||||:|::.:|..|:..:..:|||||||.|.||..:.:  
 Worm     1 MGKTSRDKRDIYYRLAKENKWRARSAFKLMQIDDEFQILKGVRRAVDLCAAPGSWSQVLSKRLYE 65

  Fly    67 -PVSSIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWLYDA 130
             ...:.::.:||.|:.||.|.|.|..|||:......:.|.....|:|:|:.||||:|......|.
 Worm    66 EDQEAKIVAIDLQPMAPIPGVIQLQGDITSVDTANQVIKHFSGEKSDIVICDGAPDVTGIHSLDE 130

  Fly   131 YQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIFV 195
            :.|..|.|.|..:::..|:.||.|:.|:|||::.:.|...:|:.||||:..||.:||:.|.|.||
 Worm   131 FMQAELILAAFNITSHVLKEGGNFLAKIFRSRNSSLLYAQMKKYFKKVYLAKPRSSRQSSCEAFV 195

  Fly   196 VCQGYLAPD-----------------HIDPRLLD--------SKYVFEE---LDLDAKKKSSLLH 232
            :|..|..|:                 .|.|.::|        |.:..|:   ||:||......:.
 Worm   196 LCLDYSPPEGFVPTMGKTSLDATDASAISPDIIDGFVTCGDLSGWDSEKSYPLDIDACFPKGEID 260

  Fly   233 PEKQKRIKAEGYTAQDIALRNDLAATEFLKAENALAALQGIGSIRIDDQRIANHKKTTPEILECC 297
            .|::||     |..:|:.......|.:        |||.               ||.:....:..
 Worm   261 EEQKKR-----YEFKDVVQPPTDPAYK--------AALD---------------KKKSGVFAKMS 297

  Fly   298 KDLKVLGRKDIKGLVQWWKDVRELFVEKETPLVVGNAADEKPKPLTQAEIEDMEDAELQTQI 359
            .||    .:.:|..:...||      :|:||      |:..|      .:|::|.|..:.|:
 Worm   298 ADL----NRQLKAELSRGKD------QKKTP------AENVP------SVEELEKAAEKFQL 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8939NP_573099.1 RlmE 1..200 CDD:440062 77/198 (39%)
DUF3381 233..366 CDD:463375 25/127 (20%)
Spb1_C 610..803 CDD:462264
R74.7NP_497843.1 RlmE 6..200 CDD:440062 74/193 (38%)
Blue background indicates that the domain is not in the aligned region.

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