DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8939 and H06I04.3

DIOPT Version :10

Sequence 1:NP_573099.1 Gene:CG8939 / 32568 FlyBaseID:FBgn0030720 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_497655.1 Gene:H06I04.3 / 175414 WormBaseID:WBGene00019168 Length:833 Species:Caenorhabditis elegans


Alignment Length:874 Identity:356/874 - (40%)
Similarity:506/874 - (57%) Gaps:118/874 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKTKVGKTRKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQN 65
            ||||.|:||.|:||:|:||||.|.||||||||:|||::|.||::|:..:|||||||||||||.|.
 Worm     1 MGKKVKIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQF 65

  Fly    66 MPVSSIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWLYDA 130
            |||||:::||||.||:||..||.|..||||.:.|.::.|||::|.||.||||||||||.||::||
 Worm    66 MPVSSLIVGVDLAPIKPIKNCIALQGDITTNETRAAIKKELKTWSADCVLHDGAPNVGLNWVHDA 130

  Fly   131 YQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIFV 195
            :||.||||:||||:||.||.||.||||||||.||:.|:.|.::|||:||..||:|||.|||||||
 Worm   131 FQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSCLIRVFEKLFKRVHVWKPAASRLESAEIFV 195

  Fly   196 VCQGYLAPDHIDPRLLDSKYVFEELDLDAKKKSSLLHPE-----KQKRIKAEGYTAQDIALRNDL 255
            ||:.|..||.:....||.|.||...|.....|.   :|:     |||:.|||||....:|:.:.:
 Worm   196 VCEVYQKPDKVGAEYLDPKKVFANPDGSEGTKP---NPQNLLIGKQKKAKAEGYDTDSLAIHSTI 257

  Fly   256 AATEFLKAENALAALQGIGSIRIDDQRIANHKKTTPEILECCKDLKVLGRKDIKGLVQWWKDVRE 320
            .||:|:|:...|..|.....|.:||::..||:|||.|::|...|:||||.::::.|::|.|.:.|
 Worm   258 NATDFIKSSGYLDILGTANVITLDDEKWKNHEKTTEEVIEYMNDVKVLGPRELRVLLRWRKSMLE 322

  Fly   321 LFVEKETPLVVGNAAD-EKPKPLTQAEIEDMEDAELQTQIETIVEEEKKDLKRKRKKTLKTKAKL 384
            . :|::...|.|.|.: |..:.||:.::||...||:...|....|:||..||:|:||.||.||::
 Worm   323 T-LEEQRKAVEGEAKEVEIEENLTEEQLEDRAMAEIDELIAKASEDEKAALKKKKKKMLKAKARV 386

  Fly   385 HEKMNLNMVIKGDDGPVEEMEHEIFDLKNIRTSAELDELL-DVQ-PDFAVDESQPEETKLPKYKY 447
            .::..|.|:|.||:||..| :.|:|.||.||.:.||.|:. |.| |||                 
 Worm   387 LKRRELKMIIDGDEGPQAE-DQEVFQLKKIRKAKELAEITKDTQAPDF----------------- 433

  Fly   448 FDKDEGNINDDLNYDDDNDEEQSEASDDEDQINDKQGLGLSDDDNDEGNAKGKNKRKKRSENPLI 512
                      |:..|.|:|||:                ||.:.:.:....:|:|  ....||.||
 Worm   434 ----------DMMEDGDSDEEE----------------GLGEGEWETHGEEGEN--SDEDENELI 470

  Fly   513 ---KSNDFRDKNTKREQRVQLWYEKDVLQNIQSDDDEETYDLNNLAKEF------KAKGVAVLGE 568
               ||.  ..|..||..|.:.|:||:.:..:.||:|::. ::|.:.|..      |.:..    |
 Worm   471 HTEKSG--MSKMEKRNARTESWFEKEEISGLVSDEDDDD-EMNAIEKHIGKNRSKKTENY----E 528

  Fly   569 STLTPDANEEVVQGKKAKRRARHE-TATKDSSSESSESE-------------------------D 607
            :|::.|.::...:|||..:....: ..|.|:..::||||                         |
 Worm   529 NTVSFDDSKGKKKGKKGGKGGEDDGFNTNDADEQASESESSDAEMDEVAKEKLSRFDAQIDLDDD 593

  Fly   608 DANE--DSDGEQPA--------AGTN----AKKVRLSENEMALGALLTRSKKTRRDLIDAAWNRY 658
            |..|  :.:|.:.|        .|.:    |||.:|:..::|:|..:..|.|..|:|.|.|||||
 Worm   594 DEEERYEDEGRRAAKRKCDKKIIGEDLKPVAKKRKLTPEQLAIGEQMIYSAKAARNLEDEAWNRY 658

  Fly   659 AFNDENVPVWFKLDEDEHMTKPTPVPKELTAEYQRKLQEVNVRPIKKVMEAKARKHRRATKRLAK 723
            |.|||::|.||..||.:|..|.|||.||..|.|:.:::|.|.||.|||.||||||.::..::|..
 Worm   659 ANNDEDLPDWFADDEKKHYFKQTPVTKEQVALYRERMREFNARPSKKVAEAKARKQKKMQRKLES 723

  Fly   724 AKKMAEKIMENSDATNHEKSKQLKKVYKKAQEKKKEVTYVVAKKQTAARRARRPAGVKGRYKVVD 788
            |||.||.|:||....:.||.:::||||..|..|:|:...:|...:....:..||   .|:||:||
 Worm   724 AKKKAEGILENDQMEHSEKVREMKKVYANATRKEKKKVELVRMTKGKKGKTGRP---NGQYKLVD 785

  Fly   789 PREKKDKRSMDAKKRREKGSKGRKGKGRK 817
            .|.|||.|:..||: :.||..|::|..:|
 Worm   786 SRMKKDLRAAKAKE-KTKGRGGKRGIPKK 813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8939NP_573099.1 RlmE 1..200 CDD:440062 133/198 (67%)
DUF3381 233..366 CDD:463375 48/138 (35%)
Spb1_C 610..803 CDD:462264 84/206 (41%)
H06I04.3NP_497655.1 RlmE 9..197 CDD:440062 125/187 (67%)
DUF3381 237..363 CDD:463375 46/126 (37%)
PTZ00121 <283..814 CDD:173412 194/589 (33%)
Spb1_C 618..800 CDD:462264 80/185 (43%)

Return to query results.
Submit another query.