DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8939 and LOC1272952

DIOPT Version :10

Sequence 1:NP_573099.1 Gene:CG8939 / 32568 FlyBaseID:FBgn0030720 Length:817 Species:Drosophila melanogaster
Sequence 2:XP_311882.6 Gene:LOC1272952 / 1272952 VectorBaseID:AGAMI1_014530 Length:882 Species:Anopheles gambiae


Alignment Length:881 Identity:455/881 - (51%)
Similarity:582/881 - (66%) Gaps:78/881 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKTKVGKTRKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQN 65
            ||||.||||.|:||||:||||:|.|||||||||||||:|||||||||||||||||||||||||||
Mosquito     1 MGKKAKVGKDRRDKFYKLAKESGYRSRAAFKLIQLNRRFGFLQQSQVCLDLCAAPGGWMQVAKQN 65

  Fly    66 MPVSSIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWLYDA 130
            ||||||||||||:||:.:.|||.|:.|||::|.:..|.|||::||.||||:|||||||:|||:||
Mosquito    66 MPVSSIVIGVDLYPIKNVPGCISLIGDITSDKTKADLAKELKTWKVDVVLNDGAPNVGKNWLHDA 130

  Fly   131 YQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIFV 195
            |||:||||:|:||:|||||.||||:||||||||||||:|||||||:|||||||||||||||||||
Mosquito   131 YQQVCLTLSAVKLATQFLRPGGWFITKVFRSKDYNALIWVLKQLFRKVHATKPSASRKESAEIFV 195

  Fly   196 VCQGYLAPDHIDPRLLDSKYVFEELDLDAKKKSS-----LLHPEKQKRIKAEGYTAQDIALRNDL 255
            |||.|.|||.||||.|||||||||||:.:|..||     .|..:..|:.|.|||.:.|:  |..:
Mosquito   196 VCQYYKAPDKIDPRFLDSKYVFEELDIQSKDISSNNILKELERKTPKKPKVEGYDSTDV--RKII 258

  Fly   256 AATEFLKAENALAALQGIGSIRID--DQRIANHKKTTPEILECCKDLKVLGRKDIKGLVQWWKDV 318
            .|.|:::::..||.|..:..|...  |:.||||.:||.|:.|||||:|:|||||||.|::|.|.:
Mosquito   259 TALEYMQSDKPLALLSRVTEITFTKADEAIANHPRTTTELKECCKDIKILGRKDIKELLRWHKLL 323

  Fly   319 RELFVEKETPLVVGNAADEKPK-------------PLTQAEIEDMEDAELQTQIETIVEEEKKDL 370
            ...|.|...     :.||:|.|             ..|..:.|.:|..:::.:|.|:.:||::..
Mosquito   324 SPEFTEAGE-----DKADDKKKKGEGEDGAKDDDDDETDVDEEIVELKQIEKEIATLQKEEERSS 383

  Fly   371 KRKRKKTLKTKAKLHEKMNLNMVIKGDDGPVEEMEHEIFDLKNIRTSAELDELLDVQPDFAV-DE 434
            ||.||||.|.:|||:||::|.||||||.||.|:.|..:|.||::.|..:|:.:||..||..| |:
Mosquito   384 KRMRKKTNKERAKLNEKLSLKMVIKGDAGPTEQGEDMVFSLKDVGTRQQLESILDQAPDIVVEDK 448

  Fly   435 SQPEETKLPKYKYFDKDEGNINDDLNYDDDNDEEQSEASDDE-DQINDKQGLGLSDDDND---EG 495
            |..|..:..:|..:|::   ...||..||.....|...||.| |...|::||.:..||.:   |.
Mosquito   449 SDDEGAEDGEYVRYDRE---TKGDLFEDDKLLSTQRADSDSEIDSDFDEKGLAMESDDEELSFEE 510

  Fly   496 NAKGKNKRKKRSENPLIKSNDFRDKNTKREQRVQLWYEKDVLQ--NIQSDDDEET-YDLNNLAKE 557
            :...|:.......||||...|:|.|..||..|.|||||::..:  |:|.:|:|.. |||:.:.:.
Mosquito   511 DEDMKDPSDDEDRNPLITDLDYRSKVDKRLHRAQLWYEQEAFKKHNLQPNDEEVVDYDLDKMIEA 575

  Fly   558 FKAKGVAVLGESTLTPDANEEVVQGKKAKRRARHET--ATKDSSSESSESEDDANEDSDGEQPAA 620
            :|..||.|||..........|.: ||||:||::|:.  ...|.||:||.|.:|.:|..:.:  |.
Mosquito   576 YKKAGVTVLGTEGADKGKESEPL-GKKARRRSKHDVNKLDGDESSDSSSSSEDEDEPQNAQ--AV 637

  Fly   621 GT--------------------------NAKKVRLSENEMALGALLTRSKKTRRDLIDAAWNRYA 659
            ||                          ..||::|||.|:|||.::...||||||:||||:|||.
Mosquito   638 GTMVHKTIEKVGGDSEGGFEIVSSEKVRKPKKIKLSEEELALGQMIISGKKTRRDIIDAAFNRYM 702

  Fly   660 FNDENVPVWFKLDEDEHMTKPTPVPKELTAEYQRKLQEVNVRPIKKVMEAKARKHRRATKRLAKA 724
            |||.|:|.||..||.:.|.:..|||:::..:|::...|.|||.|||||||||||.|.|||||.|.
Mosquito   703 FNDTNLPDWFVADELKTMQRHLPVPEDVVEKYRKSKDEFNVRTIKKVMEAKARKKRHATKRLEKI 767

  Fly   725 KKMAEKIMENSDATNHEKSKQLKKVYKKAQEKKKEVTYVVAKKQ-TAARRARRPAGVKGRYKVVD 788
            ||.||.||||.|.||.||.:.|||:||||..|||:||||||||. .:.::.|||.||:||:||||
Mosquito   768 KKKAETIMENVDNTNQEKIRLLKKLYKKADAKKKDVTYVVAKKTGVSGKKVRRPKGVEGRFKVVD 832

  Fly   789 PREKKDKRSMDAK-KRREKGSKGR-------KGKGR 816
            ||.|||:|:..|| ||.:|..|||       |||||
Mosquito   833 PRMKKDRRAEMAKDKRSKKHGKGRGKPAAGGKGKGR 868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8939NP_573099.1 RlmE 1..200 CDD:440062 162/198 (82%)
DUF3381 233..366 CDD:463375 48/147 (33%)
Spb1_C 610..803 CDD:462264 112/220 (51%)
LOC1272952XP_311882.6 None

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