DRSC/TRiP Functional Genomics Resources

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Protein Alignment exd and MATALPHA2

DIOPT Version :10

Sequence 1:NP_523360.1 Gene:exd / 32567 FlyBaseID:FBgn0000611 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_009868.3 Gene:MATALPHA2 / 850406 SGDID:S000000635 Length:210 Species:Saccharomyces cerevisiae


Alignment Length:159 Identity:38/159 - (23%)
Similarity:72/159 - (45%) Gaps:22/159 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 RQIYHQELEKYEQACNEFTTHVMNLLREQSRTRPITPKEIERMVQIIHKKFSSIQMQLKQSTCEA 227
            |:|..:| :|..|..::.||.:..||:|               ::.|....|:.|:..|..:.:.
Yeast    65 RKISDEE-KKLLQTTSQLTTTITVLLKE---------------MRSIENDRSNYQLTQKNKSADG 113

  Fly   228 VM--ILRSRFLDARRK---RRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSN 287
            ::  ::....::...|   ...|:|:...||..:|..::.|||...:..|.|.:...::..|:.|
Yeast   114 LVFNVVTQDMINKSTKPYRGHRFTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKN 178

  Fly   288 WFGNKRIRYKKNIGKAQEEANLYAAKKAA 316
            |..|:| |.:|.|..|.|.|:|.:.:..|
Yeast   179 WVSNRR-RKEKTITIAPELADLLSGEPLA 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exdNP_523360.1 PBC 42..237 CDD:461052 14/75 (19%)
homeodomain 239..299 CDD:238039 17/62 (27%)
MATALPHA2NP_009868.3 HOX 135..188 CDD:197696 16/53 (30%)

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