DRSC/TRiP Functional Genomics Resources

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Protein Alignment exd and BLH3

DIOPT Version :9

Sequence 1:NP_001259592.1 Gene:exd / 32567 FlyBaseID:FBgn0000611 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001077827.1 Gene:BLH3 / 843877 AraportID:AT1G75410 Length:524 Species:Arabidopsis thaliana


Alignment Length:458 Identity:90/458 - (19%)
Similarity:157/458 - (34%) Gaps:144/458 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDPN-RMLA----HTGGMMAPQGYGLSGQDDGQNAGSENEVRKQKD--IGEILQ-QIMSISEQS 57
            |.|.| :.|:    |:..::....|..:|.:   ..|..|..|.:..  :..:|: :.:..::|.
plant   119 MSDENGKSLSVHQHHSDQILPSSVYNNNGNN---GVGFYNNYRYETSGFVSSVLRSRYLKPTQQL 180

  Fly    58 LDEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEEEPPDPQLMRLDNMLIAEGVAGPEK 122
            |||                            |:|:|..          ::|.|..: :...|.:.
plant   181 LDE----------------------------VVSVRKD----------LKLGNKKM-KNDKGQDF 206

  Fly   123 GGGGAAAASAAAASQGGSLSIDGADNAIEHSDYRAK----LAQIRQI------YHQELE----KY 173
            ..|.:...:....||...||      ..|..:.::|    |..:.::      ||.::|    .:
plant   207 HNGSSDNITEDDKSQSQELS------PSERQELQSKKSKLLTMVDEVDKRYNQYHHQMEALASSF 265

  Fly   174 EQ-----ACNEFTTHVMNLLREQSRTRPITPKEIERMVQIIHKKFSSIQMQLKQSTCEAVMILRS 233
            |.     |...:|:..:|.:   ||........|:..:|:|..|..    :.:.|..:...|.|.
plant   266 EMVTGLGAAKPYTSVALNRI---SRHFRCLRDAIKEQIQVIRGKLG----ERETSDEQGERIPRL 323

  Fly   234 RFLDAR------------------RKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGI 280
            |:||.|                  |.:|...:.:..||..:.:.|..:|||.|..|..|:::.|:
plant   324 RYLDQRLRQQRALHQQLGMVRPAWRPQRGLPENSVSILRAWLFEHFLHPYPKESEKIMLSKQTGL 388

  Fly   281 TVSQVSNWFGNKRIR---------YKKNIG--------------KAQEEANLYAAKKAAGASPYS 322
            :.:||:|||.|.|:|         ||:..|              |.||.:.|   |....:|...
plant   389 SKNQVANWFINARVRLWKPMIEEMYKEEFGESAELLSNSNQDTKKMQETSQL---KHEDSSSSQQ 450

  Fly   323 MAGPPSGTTTPMMS----------PAPPQDSMG--------YPMGSGGYDQQQPYDNSMGGYDPN 369
            .....:....|..|          |.|.:.:.|        :..|...|::.....|...|...|
plant   451 QNQGNNNNNIPYTSDAEQNLVFADPKPDRATTGDYDSLMNYHGFGIDDYNRYVGLGNQQDGRYSN 515

  Fly   370 LHQ 372
            .||
plant   516 PHQ 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exdNP_001259592.1 PBC 41..237 CDD:397732 36/217 (17%)
homeodomain 239..299 CDD:238039 23/86 (27%)
BLH3NP_001077827.1 POX 168..296 CDD:400075 28/175 (16%)
Homeobox_KN 364..403 CDD:399131 15/38 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 54 1.000 Inparanoid score I2603
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11850
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X78
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.060

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