DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment exd and KNAT2

DIOPT Version :9

Sequence 1:NP_001259592.1 Gene:exd / 32567 FlyBaseID:FBgn0000611 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001320784.1 Gene:KNAT2 / 843388 AraportID:AT1G70510 Length:314 Species:Arabidopsis thaliana


Alignment Length:264 Identity:61/264 - (23%)
Similarity:95/264 - (35%) Gaps:94/264 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LDEAQARKHT-------LNCHRMKPAL-------FSVLCEI--KEKTVLSIRNTQEEEPPDPQL- 105
            |:|.|...|.       |:|....|.|       |...|:|  |.||.|:       .|.|... 
plant   102 LEEIQRENHVYKRDVAPLSCFGADPELDEFMVSHFETYCDILVKYKTDLA-------RPFDEATT 159

  Fly   106 ------MRLDNMLIAEGVAGPEKGGGGAAAASAAAASQGGSLSIDGADNAIEHSDYRAKLAQIRQ 164
                  |:|.|:     ..||         |||.|.|..|::|.|  :...|..|..|..:|.|.
plant   160 FINKIEMQLQNL-----CTGP---------ASATALSDDGAVSSD--EELREDDDIAADDSQQRS 208

  Fly   165 IYHQELEKYEQACNEFTTHVMNLLREQSRTRPITPKEIERMVQIIHKKFSSIQMQLKQSTCEAVM 229
               .:.:..:|...:|.:|:.:|..|.|:                                    
plant   209 ---NDRDLKDQLLRKFGSHISSLKLEFSK------------------------------------ 234

  Fly   230 ILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 294
                     ::|:....::|.:.|.:::..|...|||:|..|..||.:.|:...|::|||.|:|.
plant   235 ---------KKKKGKLPREARQALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRK 290

  Fly   295 RYKK 298
            |:.|
plant   291 RHWK 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exdNP_001259592.1 PBC 41..237 CDD:397732 41/201 (20%)
homeodomain 239..299 CDD:238039 20/60 (33%)
KNAT2NP_001320784.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11850
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X78
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.