DRSC/TRiP Functional Genomics Resources

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Protein Alignment exd and KNAT4

DIOPT Version :9

Sequence 1:NP_001259592.1 Gene:exd / 32567 FlyBaseID:FBgn0000611 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_196667.2 Gene:KNAT4 / 830973 AraportID:AT5G11060 Length:393 Species:Arabidopsis thaliana


Alignment Length:342 Identity:75/342 - (21%)
Similarity:131/342 - (38%) Gaps:74/342 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GQNAGSENEVRKQKDIGEILQQIMSISEQSLDEAQARKHTLNCHRMKPALFSVLCE-IKEKTVLS 91
            |..|.:.|    .:..|::::.:....|..:.|.:..:...|.......|...|.| :....|..
plant    83 GNTANNNN----NETSGDVIEDVPGGEESMIGEKKEAERWQNARHKAEILSHPLYEQLLSAHVAC 143

  Fly    92 IRNTQEEEPPDPQLMRLDNMLI-AEGVAGPEKGGGGAAAASAAAASQGGSLSIDGADNAIEH--- 152
            :|..    .|..||.|:|..|. ::.|         .|..|...|:||   .:.|.|..::|   
plant   144 LRIA----TPVDQLPRIDAQLAQSQNV---------VAKYSTLEAAQG---LLAGDDKELDHFMT 192

  Fly   153 ------SDYRAKLAQIRQIYHQELE----KYEQACNEFT-----------------------THV 184
                  ..::.:|.|..:::..|..    :.||:...||                       .|:
plant   193 HYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEGTGATMSEDEDEQVESDAHL 257

  Fly   185 MNLLREQSRTRPITPKEIERMVQIIHKKFSSIQMQLKQSTCEAVMILRSRFLDARRKRR--NFSK 247
            .:...:.....|:.|.|.||  .::.:....::.:|||...|.::.:|...|   ||||  ....
plant   258 FDGSLDGLGFGPLVPTESER--SLMERVRQELKHELKQGYKEKIVDIREEIL---RKRRAGKLPG 317

  Fly   248 QASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKKNIGKAQEEANLYAA 312
            ..:.:|..::.||...|||:||.|..|.::.|:.:.|::|||.|:|   |:|.......:.:...
plant   318 DTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQR---KRNWHSNPSSSTVSKN 379

  Fly   313 KKAAGASPYSMAGPPSG 329
            |:.      |.||..||
plant   380 KRR------SNAGENSG 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exdNP_001259592.1 PBC 41..237 CDD:397732 42/233 (18%)
homeodomain 239..299 CDD:238039 22/61 (36%)
KNAT4NP_196667.2 KNOX1 124..161 CDD:281744 10/40 (25%)
KNOX2 182..231 CDD:281745 8/48 (17%)
ELK 286..307 CDD:281743 5/20 (25%)
Homeobox_KN 326..365 CDD:283551 16/41 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11850
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X78
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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