DRSC/TRiP Functional Genomics Resources

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Protein Alignment exd and KNAT1

DIOPT Version :10

Sequence 1:NP_523360.1 Gene:exd / 32567 FlyBaseID:FBgn0000611 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_192555.1 Gene:KNAT1 / 826364 AraportID:AT4G08150 Length:398 Species:Arabidopsis thaliana


Alignment Length:305 Identity:68/305 - (22%)
Similarity:102/305 - (33%) Gaps:88/305 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 SIRNTQE------EEPPDPQLMRLDNMLIAEGVAGP------------EKGGG--------GAAA 129
            :|.||||      :...|.:.|:      |:.:|.|            :|.|.        .||.
plant   113 AIHNTQEANNNNNDNVSDVEAMK------AKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAAR 171

  Fly   130 ASAAAASQGGSLSIDGADNAIEHSDYRAKLAQIRQIYHQELEKYEQACNEFTTHVMNLL------ 188
            ....|..|..:.|:..:....|...:......:...|.:||.:..|...||...:.:.|      
plant   172 QDFEARQQRSTPSVSASSRDPELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQS 236

  Fly   189 -------------------REQSRTR-------PITPKEIER-MVQIIHKKFSSIQMQLKQSTCE 226
                               .||....       .|.|:..:| :...:.||:|.....|||.   
plant   237 PIHILNNPDGKSDNMGSSDEEQENNSGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQE--- 298

  Fly   227 AVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGN 291
                     |..::|:....|:|.:.|..::..|...|||||..|..||...|:...|::|||.|
plant   299 ---------LSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFIN 354

  Fly   292 KRIRYKKNIGKAQ----------EEANLYAAKKAAGASPYSMAGP 326
            :|.|:.|.....|          ..|.||......|..||.: ||
plant   355 QRKRHWKPSEDMQFMVMDGLQHPHHAALYMDGHYMGDGPYRL-GP 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exdNP_523360.1 PBC 42..237 CDD:461052 36/204 (18%)
homeodomain 239..299 CDD:238039 21/59 (36%)
KNAT1NP_192555.1 KNOX1 133..172 CDD:461051 8/44 (18%)
KNOX2 189..234 CDD:427506 8/44 (18%)
ELK 279..300 CDD:427504 6/32 (19%)
Homeobox_KN 320..358 CDD:428673 16/37 (43%)

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