DRSC/TRiP Functional Genomics Resources

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Protein Alignment exd and PBX2

DIOPT Version :9

Sequence 1:NP_001259592.1 Gene:exd / 32567 FlyBaseID:FBgn0000611 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_002577.2 Gene:PBX2 / 5089 HGNCID:8633 Length:430 Species:Homo sapiens


Alignment Length:384 Identity:265/384 - (69%)
Similarity:293/384 - (76%) Gaps:40/384 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 GGMMAPQGYGLSGQDDGQNAGSENEVRKQKDIGEILQQIMSISEQSLDEAQARKHTLNCHRMKPA 76
            ||...|.|    |.|.|..:|.....|.::|||:||||||:|::||||||||:||.|||||||||
Human    26 GGPGEPPG----GGDPGGGSGGVPGGRGKQDIGDILQQIMTITDQSLDEAQAKKHALNCHRMKPA 86

  Fly    77 LFSVLCEIKEKTVLSIRNTQEEEPPDPQLMRLDNMLIAEGVAGPEKGGGGAAAASAAAASQGGSL 141
            ||||||||||||.||||::|||||.|||||||||||:||||||||||||.||||:|||||.||. 
Human    87 LFSVLCEIKEKTGLSIRSSQEEEPVDPQLMRLDNMLLAEGVAGPEKGGGSAAAAAAAAASGGGV- 150

  Fly   142 SIDGADNAIEHSDYRAKLAQIRQIYHQELEKYEQACNEFTTHVMNLLREQSRTRPITPKEIERMV 206
               ..||:|||||||:||||||.|||.||||||||||||||||||||||||||||:.|||:||||
Human   151 ---SPDNSIEHSDYRSKLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMV 212

  Fly   207 QIIHKKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAK 271
            .|||:|||:||||||||||||||||||||||||||||||||||:|:|||||||||||||||||||
Human   213 SIIHRKFSAIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAK 277

  Fly   272 EELARKCGITVSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKA-----AGASPYSMAGPPSGTT 331
            ||||:||||||||||||||||||||||||||.|||||:||.|.|     .|.|..|...|||...
Human   278 EELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAVKTAVSVTQGGHSRTSSPTPPSSAG 342

  Fly   332 T----------------PMMS----PAPPQDSMGYPMGSGGYDQQQPYDNSMGG--YDP 368
            :                |.::    .|...:|:.:.||.|||.     ||..||  |.|
Human   343 SGGSFNLSGSGDMFLGMPGLNGDSYSASQVESLRHSMGPGGYG-----DNLGGGQMYSP 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exdNP_001259592.1 PBC 41..237 CDD:397732 163/195 (84%)
homeodomain 239..299 CDD:238039 56/59 (95%)
PBX2NP_002577.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52 9/29 (31%)
PBC 50..243 CDD:397732 163/196 (83%)
homeodomain 245..305 CDD:238039 56/59 (95%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 326..347 6/20 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 378..430 11/24 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165152648
Domainoid 1 1.000 336 1.000 Domainoid score I1122
eggNOG 1 0.900 - - E1_KOG0774
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 499 1.000 Inparanoid score I1379
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48762
OrthoDB 1 1.010 - - D348471at33208
OrthoFinder 1 1.000 - - FOG0000743
OrthoInspector 1 1.000 - - otm41138
orthoMCL 1 0.900 - - OOG6_104641
Panther 1 1.100 - - O PTHR11850
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4561
SonicParanoid 1 1.000 - - X78
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.800

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