DRSC/TRiP Functional Genomics Resources

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Protein Alignment exd and PBX1

DIOPT Version :10

Sequence 1:NP_523360.1 Gene:exd / 32567 FlyBaseID:FBgn0000611 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_047277739.1 Gene:PBX1 / 5087 HGNCID:8632 Length:486 Species:Homo sapiens


Alignment Length:411 Identity:263/411 - (63%)
Similarity:290/411 - (70%) Gaps:73/411 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EDPNRMLAHTG-GMMAPQGYGLSGQDDGQNAGSENEVRKQKDIGEILQQIMSISEQSLDEAQARK 65
            |.|..|.:|.| ||....|.....||..  .|:|.|..:::|||:||||||:|::||||||||||
Human     3 EQPRLMHSHAGVGMAGHPGLSQHLQDGA--GGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARK 65

  Fly    66 HTLNCHRMKPALFSVLCEIKEKT------------------------------------------ 88
            |.|||||||||||:|||||||||                                          
Human    66 HALNCHRMKPALFNVLCEIKEKTELKEARSRNCPSLFFLVTRIQSSVRHRVLSSASTSGNPVTPQ 130

  Fly    89 --------------VLSIRNTQEEEPPDPQLMRLDNMLIAEGVAGPEKGGGGAAAASAAAASQGG 139
                          |||||..|||||.|||||||||||:||||||||||||.||||:|||||.|.
Human   131 PTHHHPSFGWGEGKVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAGPEKGGGSAAAAAAAAASGGA 195

  Fly   140 SLSIDGADNAIEHSDYRAKLAQIRQIYHQELEKYEQACNEFTTHVMNLLREQSRTRPITPKEIER 204
                 |:||::|||||||||:|||||||.|||||||||||||||||||||||||||||:||||||
Human   196 -----GSDNSVEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIER 255

  Fly   205 MVQIIHKKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSEE 269
            ||.|||:||||||||||||||||||||||||||||||||||:|||:|||||||||||||||||||
Human   256 MVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEILNEYFYSHLSNPYPSEE 320

  Fly   270 AKEELARKCGITVSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSMAGPPSGTTTPM 334
            ||||||:||||||||||||||||||||||||||.|||||:||||.|..|:..|..|..:.     
Human   321 AKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAAKTAVTATNVSAHGSQAN----- 380

  Fly   335 MSPAPPQ---DSMGYPMGSGG 352
             ||:.|.   .|..:.|.:.|
Human   381 -SPSTPNSAGSSSSFNMSNSG 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exdNP_523360.1 PBC 42..237 CDD:461052 167/250 (67%)
homeodomain 239..299 CDD:238039 56/59 (95%)
PBX1XP_047277739.1 PBC 42..288 CDD:461052 167/250 (67%)
homeodomain 290..350 CDD:238039 56/59 (95%)

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