DRSC/TRiP Functional Genomics Resources

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Protein Alignment exd and MEIS1

DIOPT Version :9

Sequence 1:NP_001259592.1 Gene:exd / 32567 FlyBaseID:FBgn0000611 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_002389.1 Gene:MEIS1 / 4211 HGNCID:7000 Length:390 Species:Homo sapiens


Alignment Length:435 Identity:90/435 - (20%)
Similarity:146/435 - (33%) Gaps:147/435 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LAHTGGMMAPQGYGLSGQDDGQNAGSENEVRKQKDIGEILQQIMSISEQSLDEAQARKHTLNCHR 72
            |.|.|||   .|.|:.....|....:.:           :|.:..::......:....||.:.:.
Human     8 LPHYGGM---DGVGIPSTMYGDPHAARS-----------MQPVHHLNHGPPLHSHQYPHTAHTNA 58

  Fly    73 MKPA--------------------LFSVLCEIKEKTVLSIRNTQEEEPPDPQLMRLDNMLIAEGV 117
            |.|:                    ||.:|..|.||..|:...     |.:|            ||
Human    59 MAPSMGSSVNDALKRDKDAIYGHPLFPLLALIFEKCELATCT-----PREP------------GV 106

  Fly   118 AGPEKGGGGAAAASAAAASQGGSLSIDGADNAIEHSDYRA----------------KLAQIRQIY 166
            |      ||...:|.:.          ..|.|:.....||                :..|:.:.:
Human   107 A------GGDVCSSESF----------NEDIAVFAKQIRAEKPLFSSNPELDNLMIQAIQVLRFH 155

  Fly   167 HQELEKYEQACNEFTTHVMNLLREQSRTRPI-------------TPKEIERMVQII--------- 209
            ..||||..:.|:.|....::.|:.:   .||             ..::|.|...:.         
Human   156 LLELEKVHELCDNFCHRYISCLKGK---MPIDLVIDDREGGSKSDSEDITRSANLTDQPSWNRDH 217

  Fly   210 ------------------HKKFSSIQMQLKQSTCEAVMILRSRFLD-------ARRKRRN-FSKQ 248
                              |...|......:....:..:...|...|       .|.|:|. |.|.
Human   218 DDTASTRSGGTPGPSSGGHTSHSGDNSSEQGDGLDNSVASPSTGDDDDPDKDKKRHKKRGIFPKV 282

  Fly   249 ASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKKNIGKAQEEANLYAAK 313
            |:.|:..:.:.||::||||||.|::||:..|:|:.||:|||.|.|   ::.:....:::|    :
Human   283 ATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINAR---RRIVQPMIDQSN----R 340

  Fly   314 KAAGASPYSMAGPPSG-----TTTPMMSPAP-PQDSMGYPMGSGG 352
            ..:..:||:..|.|.|     ....|...|| |...||..||..|
Human   341 AVSQGTPYNPDGQPMGGFVMDGQQHMGIRAPGPMSGMGMNMGMEG 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exdNP_001259592.1 PBC 41..237 CDD:397732 39/271 (14%)
homeodomain 239..299 CDD:238039 27/60 (45%)
MEIS1NP_002389.1 Meis_PKNOX_N 108..192 CDD:406806 17/96 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..279 9/88 (10%)
Homeobox_KN 290..329 CDD:399131 20/41 (49%)
Interaction with DNA. /evidence=ECO:0000305|PubMed:26550823, ECO:0000305|PubMed:28473536 299..329 17/32 (53%)
Required for transcriptional activation. /evidence=ECO:0000250 335..390 15/55 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165152654
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X78
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.840

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