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Protein Alignment exd and tgif1
DIOPT Version :10
| Sequence 1: | NP_523360.1 |
Gene: | exd / 32567 |
FlyBaseID: | FBgn0000611 |
Length: | 376 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_955861.1 |
Gene: | tgif1 / 321756 |
ZFINID: | ZDB-GENE-030131-475 |
Length: | 273 |
Species: | Danio rerio |
| Alignment Length: | 150 |
Identity: | 43/150 - (28%) |
| Similarity: | 64/150 - (42%) |
Gaps: | 24/150 - (16%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 236 LDARRKRR-NFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR-YKK 298
:..:|||| |..|::.:||.::.|.|..|.||||:.|..|:::..::..||.|||.|.|.| ..:
Zfish 33 VSGKRKRRGNLPKESVQILRDWLYQHRYNAYPSEQEKALLSKQTHLSTLQVCNWFINARRRLLPE 97
Fly 299 NIGKAQEEANLYAAKKAAGASPYSMAGPPSGTTTPMMSPAPP-------QDSMGYPMGSGGYDQQ 356
.:.|..::.|.:. .|..|...|......|.:|. :|...|..||......
Zfish 98 MLRKDGKDPNQFT---------ISRRGSKGGEMLSDNSQSPKHGLLANGEDRNSYEPGSPHPTSN 153
Fly 357 QPYDNSMGGYDPNLHQDLSP 376
.|..| ||. .:.|||
Zfish 154 TPTSN---GYP---KKALSP 167
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.